Pseudomonas syringae pv. syringae B728a: Psyr_0543
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Entry
Psyr_0543 CDS
T00246
Name
(GenBank) Type I secretion outer membrane protein, TolC
KO
K12340
outer membrane protein
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb01501
beta-Lactam resistance
psb01503
Cationic antimicrobial peptide (CAMP) resistance
psb02020
Two-component system
psb03070
Bacterial secretion system
psb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Psyr_0543
09132 Signal transduction
02020 Two-component system
Psyr_0543
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
Psyr_0543
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Psyr_0543
01503 Cationic antimicrobial peptide (CAMP) resistance
Psyr_0543
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psb02000
]
Psyr_0543
02044 Secretion system [BR:
psb02044
]
Psyr_0543
01504 Antimicrobial resistance genes [BR:
psb01504
]
Psyr_0543
Transporters [BR:
psb02000
]
Other transporters
Pores ion channels [TC:
1
]
Psyr_0543
Secretion system [BR:
psb02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Psyr_0543
RTX toxin transporter
Psyr_0543
Multiple protein transporter
Psyr_0543
RaxAB-RaxC type I secretion system protein
Psyr_0543
Antimicrobial resistance genes [BR:
psb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Psyr_0543
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Psyr_0543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AAY35613
UniProt:
Q4ZZ09
LinkDB
All DBs
Position
complement(613307..614746)
Genome browser
AA seq
479 aa
AA seq
DB search
MLRKLSLVVAVSFASSGLTWAAELPMPTQTGLLSVYQQAVDNNADLAASRADYDARKEAV
PQARAGLLPNISGSAQNSSTRTSIDQPRAVASRSGNLYQATLSQPIFRADRWFQLQAAEA
SNEQAALELSATEQNLILQSAQSYFSVLRAQDNLASTKAEEAAFKRQLDQANERFDVGLS
DKTDVLQAQASYDTSRASRLIAQRQVEDAFQALVTLTNREYNSIEGIVHTLPVLAPTPND
AKAWVDTAAQQNLNLLASNYAVNAAEETLRQRKAGHAPTLDAVATYQRGDNDALGFSNPN
YTGRNYGGDVEQRSIGVQLNIPIYSGGLTSSQVREAYARLSQSEQRRESLRRQVVENTRN
LHRAVNTDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYASVRDYNNT
RYDYILDNLRLKQAAGTLNPGDLQDLSRYLKADYNPDKDFLPPDLATAAQKNFERPAKR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcaaactttcgttggtcgtggctgtttcgtttgcgtccagcgggttgacctgg
gcagccgaattgccgatgccaacgcagacagggctgttgagcgtttatcagcaggccgtg
gacaacaacgccgacctcgcggcctcgcgcgccgattacgatgcgcgcaaggaagccgtg
ccgcaggcccgcgccggtttgctgccgaacatttccggcagcgcccagaacagcagcacc
cgcaccagcatcgatcagcccagagccgtggccagccgcagcggcaacctctaccaggcc
acgctgagccagccgatcttccgcgccgaccgctggttccagttgcaggctgccgaagcg
agcaacgaacaggcggcactggagctgtcggctaccgagcagaatctgatcctgcaatcg
gcacagagctatttcagcgtactgcgtgcacaggacaacctggcttcgaccaaggccgag
gaagcggccttcaagcgccagctggatcaggccaacgagcgcttcgatgtcggcctgtcg
gacaagaccgatgtgctgcaggcgcaggccagctatgacacgtcacgcgccagccgactc
attgcccaacgtcaggtcgaggatgcctttcaggcgctggtgacgctgaccaaccgcgaa
tacaactcgatcgaaggcatcgtgcataccctgccggtgctggcgccgacgcccaacgat
gccaaggcctgggtcgatactgccgcgcagcagaacctcaacctgctggccagcaactac
gcggtcaatgccgccgaagaaaccctgcgccagcgcaaggccggacacgcgccgacgctc
gatgccgtggcgacctatcagcgtggcgataacgatgcactgggtttcagcaaccccaac
tacaccggtcgcaattacggcggcgacgtcgagcagcgcagcattggcgtgcagttgaac
atcccgatctacagcggcggcctgaccagctcgcaggtacgcgaagcctatgcgcgcctg
agccagagcgagcagcggcgtgaaagcctgcgtcgtcaggtggtggaaaacacccgcaac
ctgcatcgcgcggtgaataccgacgtggagcaggtccaggcccgcaagcagtcgatcatt
tccaaccagagcgcgctggaagccacagaaatcggttatcaggtcggcacccgcaacatc
gtcgacgtgctggatgcgcaacgccagctgtatgcctcggtgcgtgactacaacaacacg
cgttacgactacatcctcgacaacctgcgcctcaagcaggcagcaggcactctgaacccg
ggcgacctgcaggacctgtcgcgctacctgaaggccgactacaacccggacaaggacttc
ctgccgccggacctggcgactgctgcgcagaagaacttcgaacggcctgcaaagcgctga
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