Pseudomonas syringae pv. syringae B728a: Psyr_1045
Help
Entry
Psyr_1045 CDS
T00246
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT
KO
K18139
outer membrane protein, multidrug efflux system
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb01501
beta-Lactam resistance
psb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psyr_1045
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Psyr_1045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psb02000
]
Psyr_1045
01504 Antimicrobial resistance genes [BR:
psb01504
]
Psyr_1045
Transporters [BR:
psb02000
]
Other transporters
Pores ion channels [TC:
1
]
Psyr_1045
Antimicrobial resistance genes [BR:
psb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Psyr_1045
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Psyr_1045
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Psyr_1045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
AAA_lid_13
Motif
Other DBs
NCBI-ProteinID:
AAY36101
UniProt:
Q4ZXM1
LinkDB
All DBs
Position
1180342..1181826
Genome browser
AA seq
494 aa
AA seq
DB search
MPRRIIRGLWPVGILAFTLVISGCIGTHGIKSQGSLLHADSLVTDQAIQSAALDAHWPAA
QWWRAYGDAQLDCWVEMATLGSPSLALAAARVRQARAMAQVAESAESVQLQGNASLMRHD
WPEDQFYGPGALADTRTWDNNASLGLSYALDLWGRERNASEQAVDLAHVSAAEQRQAQLE
LQENVVRAYIQLSLDYARLDIAEAALAQQQQILDLAQRRLKGGIGTHFDVSQAETPLPEA
HRQIDALQEAIALSRNQLAALAGKGPGQGAALQRPALSLHTALTLPSALPAELLGQRPDV
VAARWQVAAQARGIDVAHGGFYPNVDLVGSLSYMATGGGVLEFLTGSKLGYKVGPAISLP
IFDAGRLRAELGRASAAYDQAVAHYNQTLVMALKSVSDQLIRRASMDKQQALAAESVASA
QKTYDIALIAWQRGLTDYLNVLNARTQLFRQQQVQQQVEAARLEAYAGLVVALGGDGDGN
GHSAHTAAESGGGQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgtcgcatcatcagagggctctggcccgtcggtattctggcttttacgctggtc
atcagcggctgtatcggaacacatggaatcaaatcgcagggcagtctcctgcacgctgac
agcctggtcaccgatcaggcgattcagagcgctgctctcgacgcccattggcccgcagcg
caatggtggcgtgcctacggcgacgcgcaactggactgctgggtcgagatggcgacgctg
ggcagcccgagtctggcacttgctgcggctcgtgtgcgccaggcaagggcgatggcgcag
gtcgccgagtctgccgagtccgtgcagctgcagggcaacgccagcctgatgcgtcacgac
tggcccgaggatcagttttatggtcccggagcgctggccgatactcgcacctgggacaac
aatgcgtcgctgggcttgagctacgcgctggacctgtggggacgtgaacgcaacgccagc
gagcaggccgttgatctggcgcatgtgagtgctgccgagcagcgtcaggcgcagctcgaa
ttgcaggaaaacgtggtccgcgcctatatccagctgtccctcgactacgcccgactggat
atcgccgaagcggccctggcccagcagcaacagatactcgacctggcgcagcgccgcctc
aagggcgggatcggcacgcacttcgacgtcagtcaggccgaaaccccgctgcctgaggcg
catcggcagatcgacgcgctgcaagaggccattgccctgagtcgcaaccagttggccgcg
ctggcaggcaaggggccggggcagggcgcggccttgcagcggcctgcgctgtcgttgcat
accgcactgacattgccctcggcactgcctgccgaactgctgggtcagcgacctgacgtg
gtggctgcgcgctggcaggtggcggcgcaggcacgcggtatcgacgttgcacatggcggc
ttttatcccaatgtcgatctggtcggcagcctgagttacatggccacgggcggcggcgtg
ctggagtttctgaccggcagcaagctgggctacaaggtcgggccggccatcagcctgccg
atcttcgacgctggacgcttgcgggcggagctggggcgggcgtcggctgcttatgatcag
gccgtggcgcattacaaccagacgctggtgatggcgctgaaaagtgtctccgaccagttg
attcggcgtgcctcgatggacaagcagcaggcactcgccgccgagtcggtggcgtcggcg
caaaagacctacgacattgccctgatcgcctggcagcgcggcctgaccgattacctgaac
gtgctcaatgcgcgcacgcaactgttccgccagcaacaggttcagcaacaggtcgaggct
gcgcgactggaagcctacgccgggctggtggtggcgctgggcggtgacggggatggcaat
ggtcattccgcacacaccgccgccgagtccgggggcgggcaatga
DBGET
integrated database retrieval system
