Pseudomonas syringae pv. syringae B728a: Psyr_2485
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Entry
Psyr_2485 CDS
T00246
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT
KO
K18139
outer membrane protein, multidrug efflux system
Organism
psb
Pseudomonas syringae pv. syringae B728a
Pathway
psb01501
beta-Lactam resistance
psb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Psyr_2485
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Psyr_2485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psb02000
]
Psyr_2485
01504 Antimicrobial resistance genes [BR:
psb01504
]
Psyr_2485
Transporters [BR:
psb02000
]
Other transporters
Pores ion channels [TC:
1
]
Psyr_2485
Antimicrobial resistance genes [BR:
psb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Psyr_2485
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Psyr_2485
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Psyr_2485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DICT
POT1PC
Motif
Other DBs
NCBI-ProteinID:
AAY37524
UniProt:
Q4ZTJ8
LinkDB
All DBs
Position
2886987..2888450
Genome browser
AA seq
487 aa
AA seq
DB search
MTERLAFTSRPTGLIRPFALGLCVVLLSACAVGPDYQKPSMAAPAQFKAAQGWRTATPSD
GMGKGAWWEVYKDPQLNALVERLNTSNQTVAQYDAQYRQAQTLVRSSRAAFLPTLDLTTG
KTRSGQGTGTSNSGTSASGIRNSYNAQLGVSWEADVWGKLRRGLEADTANAQASLADLAA
MRLSLQSELVQNYLQLRVIDEQKRLLESTVDAYQRSLTLTQNQYRAGISGSDAVAQAQTQ
LKSTQADLIDLAWQRAQFENAIAVLMGMAPADFNLPASTSIPQLPQIPPGLPSQLLERRP
DIAAAERSVMGANANIGVARAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLALT
LFDGGRRSAEVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALVSA
RDSLRLTNNQYKAGLIGYLDVVNVQATALSNERSVLSVLQSRLIASVQLIAALGGGWDAE
TGLTLRE
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacgcctggcattcacctcccgcccgacagggctgattcgtccattcgcgctg
gggctttgtgtggtgctgctcagcgcctgcgctgtgggtccggattaccagaagccgtcc
atggccgcacccgcgcagttcaaggctgcgcagggctggcgtacggcgacgccgagtgac
gggatgggcaaaggtgcgtggtgggaggtgtacaaggacccgcaactgaacgcgctggtc
gagcgccttaacacctccaaccagaccgtcgcccagtacgatgcgcagtatcgacaggca
cagacactggtgcgcagctccagggctgcattcctgcctacgcttgacctgacaaccggc
aaaacccgctcggggcagggcacaggcacgtcgaatagcggcacgagtgcctcggggatt
cgcaacagttacaacgcgcaactgggcgtcagttgggaggccgatgtctggggcaagctg
cgtcgcgggctggaggctgacaccgccaatgctcaggcaagtcttgcggacctggccgcg
atgcgtctgagtctgcaatcggagctggtacagaattacctgcaattgcgcgtgatcgat
gaacaaaaacgcctgctcgaatccacagtggatgcctatcagcgctccctgacgctgacg
cagaaccagtaccgggccggtatctccggaagtgatgctgtcgcgcaggcgcagacgcag
ttgaaaagcacccaggccgatctgatcgatctggcctggcagcgtgcgcaattcgagaat
gccatcgcggtactgatgggcatggcaccggcagacttcaatctgcccgccagcacctcg
attccgcagttgccgcagatcccgccaggcctgccttcgcagctgctcgaacgccgacct
gacattgccgcagccgagcgctcggtgatgggcgccaatgccaacatcggcgtcgccagg
gccgcttactacccggacttcacgctgagcatgagcggcggatacagtagcagtaccttt
gccaactggatcagcctgcccaaccgcttctggtcggtaggcccgcagctggcgctgacc
ctgttcgacggcggcaggcgctcggccgaggttgatcgtaccgaggccgtgtatgaccag
actgttgcccagtaccggcagaccgtgctgaacggttttcaggaggtcgagaactatctg
gttcagctcaaggtatacgagcaggaggctgcggtgcgccaggaagcgctggtctcggct
cgtgattcgctgcgcctgaccaacaatcaatacaaggccgggctgatcggttatctggac
gtcgtcaatgttcaggcgactgccttgagcaacgaacgcagtgtgctcagcgtgctgcaa
agccggttgattgccagcgttcaattgatcgccgcactgggcgggggctgggatgccgaa
acaggtttgacgctccgggaataa
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