Pseudomonas sp. Stari2: NH234_12780
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Entry
NH234_12780 CDS
T10554
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
psdt Pseudomonas sp. Stari2
Pathway
psdt01501
beta-Lactam resistance
psdt02024
Quorum sensing
Module
psdt_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
psdt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NH234_12780
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NH234_12780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psdt02000
]
NH234_12780
01504 Antimicrobial resistance genes [BR:
psdt01504
]
NH234_12780
Transporters [BR:
psdt02000
]
Other transporters
Pores ion channels [TC:
1
]
NH234_12780
Antimicrobial resistance genes [BR:
psdt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NH234_12780
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
NH234_12780
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
NH234_12780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
ABHD18
Motif
Other DBs
NCBI-ProteinID:
XCY02757
LinkDB
All DBs
Position
complement(2788185..2789597)
Genome browser
AA seq
470 aa
AA seq
DB search
MSRLPISLLSMALLMGGCSLIPDYQRPASPSAAQYPKGPAYPAPTQTTTAVEDWRGLFND
PALQQLIESALVNNRDLRVAALNVEAFQAQYRIQRADLLPAVSANANELRQRVPASVTKT
KAAITSTYSANLGISAYELDFFGRVRSLSEQALMSWLATEEARRSAQLSLVANVANAYLT
WRADQELLALAQETLAADEKSLHLTTRNREAGKSSALDQIQAQTSVDSTRASLARYQRQV
AQDLNSLTLLVGAPVPETLPARPLASDLVAQVPAGLPSDLLQRRPDILQAEYKLKAANAN
IGAARAAFFPSVSLTANAGTSSRDLSGLFKGGSGAWTFQPQINLPIFNAGSLRASLDYAK
LQKDITVAEYEKTIQTAFQEVSDGLAARETYQQQLQAQRDLVQATQDYYDMAQHRYRTGV
DSSLTFLDAQRSLFSSQQGLISDRLAQLVAQVNLYTALGGSWSPVEPSSQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggttgccgatctccctgctgtccatggcgttgctgatgggcggttgctcgttg
attccagattatcagcgcccggcgtcacccagcgcggcgcaatatcccaaaggccccgcc
taccctgcgccaacccagaccacgaccgctgtcgaggactggcgcgggctgttcaatgat
ccggcgttgcagcagttgattgaaagcgcactggtcaataaccgtgacctgcgcgttgcg
gcactgaacgtcgaagcattccaggcgcagtaccgcattcagcgcgccgatctgctgccg
gcggtttcagccaatgccaatgagctgcgccaacgggtgccggccagcgtgaccaaaacc
aaagcggcgatcacctcgacctactcggcgaacctcggcatcagcgcctacgaactggat
tttttcggcagggtccgcagcctcagcgaacaggccttgatgagctggctggccaccgaa
gaagcccggcgtagcgcgcaattgagcctggtggccaacgtcgccaatgcctacctgacc
tggcgcgccgatcaggagttgctggccctggcccaggaaaccctggctgccgacgagaaa
agcctgcacctgaccacccgcaaccgcgaggccggaaaatcttcggcgctggatcagatc
caggcgcagaccagtgtcgacagcacccgcgccagcctcgcccgctatcaacgccaggtc
gctcaggaccttaacagcctgaccctgctggtcggggcaccggttccggaaacgctgccg
gcacgtccactggccagtgatctggtggcgcaagtcccggccggattgccgtcggatctg
ctgcaacgccggccagacattcttcaggccgaatacaagcttaaagcggccaacgccaat
atcggcgcggcccgggcggcgttcttccccagtgtcagcctgaccgccaacgccggaacc
tccagtcgcgacctgtcgggtctgttcaagggtggctccggtgcctggaccttccagccg
cagatcaacctgccgatcttcaacgccggcagcctgcgcgccagcctcgattacgcaaag
ttgcagaaggacatcaccgtcgccgaatacgaaaagaccattcagaccgccttccaggaa
gtctccgacggtctcgccgcgcgggagacctatcagcaacagcttcaggcccagcgcgat
ctggtgcaggcgacccaggactattacgacatggcgcagcaccgctatcggaccggggtc
gatagcagcctgacgttcctcgatgcacagcgttcgctgttcagttcgcagcaaggtctg
atctccgaccggttggcgcaactggtggcgcaagtgaacctgtacaccgcactgggcggc
agctggagcccggtcgagccgtcctcccaataa
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