Pseudodesulfovibrio cashew: GM415_12605
Help
Entry
GM415_12605 CDS
T06353
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
psel
Pseudodesulfovibrio cashew
Pathway
psel01501
beta-Lactam resistance
psel01503
Cationic antimicrobial peptide (CAMP) resistance
psel02020
Two-component system
psel03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GM415_12605
09132 Signal transduction
02020 Two-component system
GM415_12605
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GM415_12605
01503 Cationic antimicrobial peptide (CAMP) resistance
GM415_12605
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psel02000
]
GM415_12605
02044 Secretion system [BR:
psel02044
]
GM415_12605
01504 Antimicrobial resistance genes [BR:
psel01504
]
GM415_12605
Transporters [BR:
psel02000
]
Other transporters
Pores ion channels [TC:
1
]
GM415_12605
Secretion system [BR:
psel02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
GM415_12605
RTX toxin transporter
GM415_12605
Multiple protein transporter
GM415_12605
RaxAB-RaxC type I secretion system protein
GM415_12605
Antimicrobial resistance genes [BR:
psel01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
GM415_12605
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
GM415_12605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QGY40935
UniProt:
A0A6I6JDM5
LinkDB
All DBs
Position
2795558..2796922
Genome browser
AA seq
454 aa
AA seq
DB search
MYLKRSLAVFLAFMALLAFSSMALAQDADPAPGSEMAASEDFSGPFDLARCVKRALEVNP
SMTAIRAQLTGSQFGTKSSFGNFLPTVTGTYGYKYYDRKNTYSNDKDNWAAGLNLSQPVF
KGFNLLASWQKAKLTEESNMASLTDVELTLVSNVQSTFLSLLKARMDVKSAEDSVARLES
QLKVISAFYEVGLRPKAEVLDAEVDLASAQQDLLTAKNGVSTQEAQLNTLLNIPLETQVD
YVGELKYIPFGLTLQQCLTRAYASRPDLVIGEKSVEMAKKDVTMAASSFYPQVDADMDYV
NQGTDPGFSKGGYAYRQKEYWTAGVSASLNLFQGGADYYDYKKVQESVKQVQAQLEDTRL
SAGFEVKTALLNISEAADRITVAKKSVTAAQEAYRMAVARYQAQVGTNTDVLNAQSRLTT
SEAQLSQALADYGTAISSLYVAMGEKNLGLTKAE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcaaacggtctttggctgtttttctggcgttcatggctctgctggccttttcg
tccatggcgctcgcccaggatgccgaccccgcacccggttccgaaatggctgcctcggag
gatttctccgggccttttgacctggcccgttgcgtcaagcgcgccttggaggtcaacccg
agtatgaccgctatcagagcgcaactcaccggctcccagttcggcacaaagtcatccttc
ggaaactttctgcctactgtgaccggcacatacggttacaagtattatgatcggaagaac
acgtattccaacgacaaggacaactgggccgcaggtttgaacctgagtcagcccgtgttc
aagggcttcaatctgctggcttcctggcagaaggccaagttgacggaagagtccaacatg
gcctccctgaccgatgtcgaactgaccttggtttccaacgtgcagtccactttcctgtcg
ctgctcaaggcgcgcatggacgtgaagagcgccgaggactccgtggcccgtctggaatcc
cagctcaaggtcatcagcgcattttatgaagtcggtctgcggcccaaggccgaggtcctg
gatgccgaggtcgatctggcttccgcccagcaggatctgctgaccgccaagaacggtgtc
tccacgcaggaggcgcagctcaacaccttgctgaatatcccgcttgagactcaggtcgac
tacgtcggcgagctcaagtacatcccttttggcctgaccctgcagcagtgcctgacccgg
gcctatgcatcccgtcccgatctggtcatcggtgagaagagcgtggaaatggccaagaag
gacgtgaccatggccgccagcagcttctacccgcaggtggacgctgatatggactacgtc
aatcagggtactgaccctggcttcagcaagggcggctacgcctatcgccagaaggaatac
tggaccgccggcgtctccgcatccctgaacctgttccagggcggcgccgactactatgac
tacaagaaggtgcaggagagcgtgaagcaggttcaggcccagctcgaagacactcgcctg
agcgccggtttcgaagtcaagaccgccttgctgaatatctccgaggccgctgatcgcatc
accgtggccaagaagtccgtgacagcggcccaggaagcctaccgtatggccgtggcccgc
taccaggctcaggtcggaaccaacaccgacgtgctcaacgcgcagtcccgcctgaccacc
agcgaggctcagctctcgcaggctttggccgactacggcactgccatctcctctctgtac
gtcgccatgggcgaaaaaaacctgggtttgaccaaggcagagtaa
DBGET
integrated database retrieval system