Pseudomonas sessilinigenes: C4K39_5574
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Entry
C4K39_5574 CDS
T07575
Name
(GenBank) Outer membrane channel TolC (OpmH)
KO
K12340
outer membrane protein
Organism
psep
Pseudomonas sessilinigenes
Pathway
psep01501
beta-Lactam resistance
psep01503
Cationic antimicrobial peptide (CAMP) resistance
psep02020
Two-component system
psep03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psep00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
C4K39_5574
09132 Signal transduction
02020 Two-component system
C4K39_5574
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C4K39_5574
01503 Cationic antimicrobial peptide (CAMP) resistance
C4K39_5574
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psep02000
]
C4K39_5574
02044 Secretion system [BR:
psep02044
]
C4K39_5574
01504 Antimicrobial resistance genes [BR:
psep01504
]
C4K39_5574
Transporters [BR:
psep02000
]
Other transporters
Pores ion channels [TC:
1
]
C4K39_5574
Secretion system [BR:
psep02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
C4K39_5574
RTX toxin transporter
C4K39_5574
Multiple protein transporter
C4K39_5574
RaxAB-RaxC type I secretion system protein
C4K39_5574
Antimicrobial resistance genes [BR:
psep01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
C4K39_5574
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
C4K39_5574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AZC27215
LinkDB
All DBs
Position
complement(6018063..6019571)
Genome browser
AA seq
502 aa
AA seq
DB search
MPLLSRGCISRLRPNDFPYVEQTMTESMHLSRRALAGCLLILLSPFAGLVRATEPQAMPS
DLWRVYQDARHNNSELAAARADQAARAEAVPQARAGLLPTLSASAEHNGTSTSLQQPRQA
TRRSGTSYQAVLNQPVFRAERWFGLKAAEAEDQQAMLELAAAEQKLMLDSAQAYFGLLKA
QDALAAATAEEAALKRQLALAQRGLQLGLSDRTDVLQAAAGHDTAQANRIVARKRTDDAF
EALDTLTHQQYPALQGLRHDMPVLLPEPNDARRWVDSAVRQNLTLQASQYALEATQQTLK
ARKAGHAPTLDAVLRYQVGDNDNLGYGNSDIRGSGYGGNVQQRSVGLQLNIPLFSGGQTS
SQVREAYQRMSQRESLNDNLRRQVVEQTRNLHRGLNSGADQVRARRQSIISNQGAVLASQ
LGLQVGTRNIVDVLEAQRQLYNAVRQYNDSRYDYILDTLRLKQAAGTLSPEDLKALCDYL
KADYDPDRDFLPPEFPRRLAAR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcctgtcccgtggctgcatttcccggctacggccgaatgattttccctacgta
gaacagaccatgaccgaatccatgcatttatcgcggcgagccctggccggctgcttgctc
atactgttgtcgccgttcgccggcctggtccgggcgacagagccccaggccatgcccagc
gatctgtggcgggtgtaccaggatgcccggcacaacaacagcgaactggctgcggcccgt
gccgaccaggctgcccgtgccgaggcggtgccccaggcccgtgccgggctgttgcctacg
ctgtcggccagcgccgagcacaacggcaccagcacctcgctgcaacagccgcggcaagcc
actcggcgcagtggcaccagctaccaggcggtgctgaaccagccggtgtttcgtgccgag
cgctggttcggcctcaaggccgccgaggccgaggaccagcaggccatgctggagctggcg
gcggccgagcagaaactgatgctcgacagcgcccaggcctatttcggcctgctcaaggcc
caggacgccctggccgcagccaccgccgaagaggcggcgctcaagcgccagctggctctg
gcccagaggggcttgcaactgggcctgtcggaccgcaccgatgtgctccaggccgcggcc
gggcatgacaccgcgcaggccaaccggattgttgcgcgcaagcgtaccgacgatgccttc
gaggccctggacaccttgacgcaccagcaatacccggccctccagggcctgcggcacgac
atgccggtgctgctgcccgagcccaacgatgcccggcgctgggtcgacagtgcggtacgc
cagaacctcaccttgcaggccagccagtacgccctggaggcgacgcagcagaccctcaag
gcgcgcaaggccgggcacgctccgaccctggacgcggtgctgcgttaccaggtgggcgac
aacgacaacctgggttatggcaacagcgatatccgtggcagtggctacggtggcaatgtc
cagcagcgttccgtcggcctgcaattgaacattccgttgttcagtggcggccagacctcc
tcccaggtgcgcgaggcctatcagcggatgagccagcgcgagtccctcaacgacaacctg
cggcgccaggtggtggagcagacccgcaacctgcatcgcggcctcaacagcggggccgac
caggtccgggcccggcgccaatcgatcatttccaaccagggcgcggtgctggcttcgcag
ctgggcttgcaggtcggcacgcgcaacatcgtcgatgtgctggaggcccagcgccagttg
tacaacgccgtgcgccagtacaacgacagccgctacgactacattctcgacaccctgcgg
ctcaagcaagcggcgggaaccttgtcgcccgaggacctcaaggcgctttgtgattacctc
aaggccgactacgatcctgaccgcgatttcttgccgccggagtttccacgccggctggcg
gcgcgctga
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integrated database retrieval system
