Pseudovibrio sp. FO-BEG1: PSE_4500
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Entry
PSE_4500 CDS
T01669
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
psf
Pseudovibrio sp. FO-BEG1
Pathway
psf01501
beta-Lactam resistance
psf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSE_4500
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSE_4500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psf02000
]
PSE_4500
01504 Antimicrobial resistance genes [BR:
psf01504
]
PSE_4500
Transporters [BR:
psf02000
]
Other transporters
Pores ion channels [TC:
1
]
PSE_4500
Antimicrobial resistance genes [BR:
psf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PSE_4500
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PSE_4500
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PSE_4500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AEV39002
UniProt:
G8PHD2
LinkDB
All DBs
Position
complement(4854500..4855882)
Genome browser
AA seq
460 aa
AA seq
DB search
MRSLSHKLILAASGVLLVSCTTSLSPERTTFTEEMAVGQTPTEWSQKGSSHGQALSSLLA
LSSDKKLNKHVDAVLANNISLRQSVLDLQKAELERDKASGTLWPTLTFNSQADRQRVKST
QGSSYQNSVGGDLTVQWEADLWGKLSDRAYASDRTLRASAHDLMAARASLAAQAMRNWVQ
LTALEKLANLDRSRISSLRNTEQIISDQFTRGIGELSDLEAARSATANAQSDLADRTVQI
DQLKRQMQVAASQMPNTHFKTGSLLPNVKLPKGAMPATTLGRRPDLLAAYERAAAADLQH
KASYKDLLPTFSVNFTASDQSASLADLLNSGPAWRLLGSLSAPILDGGNRRLTAKQADLD
AARLWLSYRQTLLTAVMEVENGLQNETILRKREQILTRALNHSQSNYEQYERRYRDGLTD
IVTLLSAERDAFAARQAVVNIRSSRMQNRVDLAVAFGIGL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctttatcgcacaaactcattcttgctgcatcgggcgttttgctggtaagctgc
accaccagtctcagtcctgaacggactacatttacggaagagatggcagttggtcagacg
ccaacagagtggagccagaaaggttcttctcacgggcaggctctttcgtctttgcttgct
ttgagcagtgataagaaactgaacaagcatgttgatgcggtgctggcgaacaacatctcg
cttcgccagtctgtgctcgatttgcagaaagctgagctggagcgcgataaagcttctggt
acgctctggccgacactgacattcaacagtcaagcagatcgccaacgtgtgaaatctacc
caaggctcgtcctatcagaactccgtaggcggagacctcacagtccagtgggaggcggat
ctttgggggaagctctctgaccgagcatatgcttctgaccggaccttgagggccagtgct
catgaccttatggctgcgcgagcttctctggctgcacaggctatgcggaactgggttcag
ctcacggctctggagaaactagccaatctggatcgatcccgcatttccagcctgcgcaac
acagagcagatcatttccgatcagttcacgcgcggtattggcgagctgagtgatctggaa
gcggcgcgttctgcgacggccaatgcgcaatctgatctggctgatcggactgttcagatc
gatcagttgaagcggcagatgcaggttgcggccagccagatgccaaacactcattttaag
actggtagcttgctccccaacgtcaagctgcctaagggcgccatgcctgccaccactctc
gggcggcggccagatcttttagctgcttatgagcgggccgcagctgcggacctgcagcat
aaagccagctacaaggatctgctgccaaccttttcagtcaacttcactgcaagcgatcaa
tccgcaagccttgcagatctgttgaacagtggaccggcatggcgtctccttggctctttg
tctgcgcccattctggatggtggcaatcgccgattgacggcaaagcaggctgatctggac
gcggcccgtctctggctatcctatcgacagactttgctgactgcggtgatggaagttgag
aacgggcttcagaacgaaaccatcttgcgcaaacgtgagcagatcctgacccgtgctcta
aaccactcccaaagcaactatgagcaatacgagcggcggtatcgtgatggcctgacggac
atcgtgaccttgctctctgcggaacgggatgcgtttgctgcccgtcaggcggtggtgaac
attcgcagcagcagaatgcagaaccgtgttgatctggctgttgctttcggcatcgggctt
taa
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