Plesiomonas shigelloides: SAMEA2665130_0322
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Entry
SAMEA2665130_0322 CDS
T04378
Name
(GenBank) type I secretion outer membrane protein, TolC family
KO
K12340
outer membrane protein
Organism
pshi
Plesiomonas shigelloides
Pathway
pshi01501
beta-Lactam resistance
pshi01503
Cationic antimicrobial peptide (CAMP) resistance
pshi02020
Two-component system
pshi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pshi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SAMEA2665130_0322
09132 Signal transduction
02020 Two-component system
SAMEA2665130_0322
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMEA2665130_0322
01503 Cationic antimicrobial peptide (CAMP) resistance
SAMEA2665130_0322
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshi02000
]
SAMEA2665130_0322
02044 Secretion system [BR:
pshi02044
]
SAMEA2665130_0322
01504 Antimicrobial resistance genes [BR:
pshi01504
]
SAMEA2665130_0322
Transporters [BR:
pshi02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMEA2665130_0322
Secretion system [BR:
pshi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SAMEA2665130_0322
RTX toxin transporter
SAMEA2665130_0322
Multiple protein transporter
SAMEA2665130_0322
RaxAB-RaxC type I secretion system protein
SAMEA2665130_0322
Antimicrobial resistance genes [BR:
pshi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SAMEA2665130_0322
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SAMEA2665130_0322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
CsoSCA_N
Motif
Other DBs
NCBI-ProteinID:
SBT59899
LinkDB
All DBs
Position
1:339668..341092
Genome browser
AA seq
474 aa
AA seq
DB search
MRLMHWKRKLSALSLAVSLLPVASGVAAAPLNFDQAWQTLQQVNDGLKAEMSAAERAQKM
AQASDGLNLPKVDLNAQVTRLSDPLSMDLKEIQPFPTLAPKLDQLLGGLVSSGLLSPEAV
AKLKSIPTETDLSNQTVKTAGVNALWVIYSGGRISAAQSAAYAQASEAQQQFALKRLQAF
SDLTRFYYGVTLAQNVYQTRTQVAHALAQHLMHAQKLEQHGQIAKVERLSAQVAYDRAKV
EAENARRELEIAQLVLDELLHQNDVQPSSPLVTKLTLPSLSTLVRDALNANPAMSLLDAK
DKQAQSLEKAERGRYLPNVAAFGNYNLYHDDSILGERAPDWMVGVGVSVPLVDNSGRNDL
LAAAHMARKEVGYRRAELQRQLKVGVEQAYRELEQAKTEYDSLQSSQALAKENFLLRSKA
FEQGLATSLDVVDARMTEAAIDTQRLAASYRMTNALAKLLTLTGQPDAFNRYQR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcggttaatgcactggaaacggaagttgtcagccctgtcactggcagtttctttgtta
cctgtggcctcgggggtggcggcagcacctttgaattttgatcaggcttggcagactctg
cagcaggtcaatgacggcttaaaagcagagatgagcgcggctgagcgagcacaaaaaatg
gcgcaagcgtcggatgggctgaatttgccgaaggtcgatttgaatgcgcaggtcactcgg
ttaagtgatccgctgtcgatggatttaaaagagatccagccgtttccaaccttggctccc
aagctggatcaattgctcggagggttggtttccagtggcttactgagtcctgaggcggtc
gctaaacttaaaagtatccctaccgaaaccgatttatcgaaccaaacggtgaaaaccgca
ggggttaatgcgctgtgggtgatttactccggtggccgcattagcgccgcgcaaagcgcc
gcctatgcgcaagcctcggaagcgcagcagcagtttgcgttaaagcgcttgcaggcgttt
tccgatttgacccgcttctattatggcgtgacgctggcgcaaaacgtctaccagacccgt
acccaagtggcgcatgcattggcgcagcatctgatgcacgcgcaaaagctcgaacagcat
ggccagatagcgaaggttgaacgtctgtcggcacaggtggcgtacgatcgcgctaaggta
gaggcagaaaatgcccgtcgtgaactggaaatcgcgcagttggttttggatgagttgctg
catcaaaacgatgtacagcctagctcgccactggttaccaagctgaccctgccgtcactc
tctacgctggtacgtgatgcgctgaatgcgaaccccgcgatgtcactgctggatgctaaa
gataagcaagcacaaagcttggaaaaagccgagcgtggtcgttatctgccgaatgtggcg
gcatttggtaactataacctgtatcacgatgacagcattctgggcgagcgcgcccctgat
tggatggtcggcgtgggagtcagcgtgccgctggttgataacagtggacgtaatgatttg
ctggctgccgcacacatggcgcgcaaagaggtgggctatcgccgcgccgagttgcagcgc
caattaaaggtaggggttgagcaagcgtaccgcgagctggagcaggcgaagaccgaatac
gattccctacaatcgagtcaggcattggccaaagagaacttcttgctgcgcagtaaagcc
tttgagcaagggctggcgacctctttagatgtggtggatgcgcgtatgaccgaagcggcc
attgatacccagcgattagctgccagttatcggatgaccaatgcgttggccaaattgctg
accttaaccggtcaaccggatgcatttaaccgctaccagcggtaa
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