Pseudomonas sp. HS6: JJN09_00925
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Entry
JJN09_00925 CDS
T09971
Symbol
emhC
Name
(GenBank) efflux RND transporter outer membrane subunit EmhC
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs01501
beta-Lactam resistance
pshs02024
Quorum sensing
Module
pshs_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JJN09_00925 (emhC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JJN09_00925 (emhC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_00925 (emhC)
01504 Antimicrobial resistance genes [BR:
pshs01504
]
JJN09_00925 (emhC)
Transporters [BR:
pshs02000
]
Other transporters
Pores ion channels [TC:
1
]
JJN09_00925 (emhC)
Antimicrobial resistance genes [BR:
pshs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JJN09_00925 (emhC)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
JJN09_00925 (emhC)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
JJN09_00925 (emhC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
UQS15449
LinkDB
All DBs
Position
185801..187261
Genome browser
AA seq
486 aa
AA seq
DB search
MSKSLLSIAVAAFVLSGCSLIPDYQQPQAPVAAQFPQGPAYSPAQAPAQAAAEQGWKQFF
HDPALQQLIQVALENNRDLRVAALNIDAYAAQYRIQRADLFPAVSANASGSRQRVPARAS
QTGEASITSSYTATVGISAYELDLFGRVRSLSEQALQQYFATEEARRSTQISLVASVANA
YLTWQADKELLKLTQDTLGAFEESYKLTSRSNEVGVASALDLAQSRTSVENARAQLARYT
RQVAQDENSLTLLLGTGVPANLQAAKPLADDLLSDVPAGLPSDLLQRRPDILQAEYNLKA
ANANIGAARAAFFPSISLTANAGSLSPDLSGLFKGGSGTWLFQPQINLPIFNAGSLRASL
DYAKIQKDIGVANYEKSIQTAFQEVADGLAARQTYTEQLQAQRDFVQANQDYYRLAERRY
RIGVDSNLTFLDAQRQLFSAQQALITDRLAQLTSAVNLYKALGGGWNAQTAQNEPLKEEA
PKMKLF
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcgctactctccatcgcagtcgccgccttcgtgctgagcggttgctcgctg
ataccggattatcagcagccgcaagcaccggtggccgcgcaattcccgcagggcccggcg
tactcgccggcccaggcaccggcgcaggccgctgccgagcaaggctggaagcagtttttc
catgaccctgccctgcaacagctgatccaggtcgccctggaaaacaaccgcgacctgcgt
gtcgcggcgttgaacatcgacgcctacgcggctcagtaccgcatccagcgtgccgacctg
ttcccggccgtttcggccaatgccagcggcagccgtcagcgggttccggcccgtgcgtcg
cagaccggtgaagcgagcatcaccagttcctacaccgccaccgtcggcatcagcgcctac
gagctcgacctgttcggtcgggttcgcagcctgagcgaacaagcgctgcaacaatacttc
gccaccgaagaagcgcgccgcagcacccagatcagcctggtggccagcgtggccaatgcc
tacctgacctggcaggccgacaaggaactgctgaagctgactcaggacaccctcggtgcc
ttcgaggaaagctacaagctgaccagccgcagcaacgaggtcggtgtggcctcggcgctg
gacctggcgcagtcgcgcacctcggtcgagaacgctcgtgcacaactggcgcgctacacc
cgccaggtcgctcaggacgaaaacagcctgaccctgctgctcggcaccggcgtgccggcc
aacctgcaagcggccaaaccgctggccgacgacctgctcagcgatgtgccggccggtttg
ccgtcggatctgctgcaacgtcgtccggacatccttcaggccgagtacaacctgaaggcc
gccaacgccaacatcggcgcggcccgtgcagcgttcttcccgagcatcagcctgaccgcc
aacgcgggcagcctgagcccggacctgtccggcctgttcaagggtggttcgggcacgtgg
ctgttccagccgcagatcaacctgccgatcttcaacgccggcagcctgcgcgccagcctc
gactacgccaagatccagaaagacatcggcgtggcgaactacgagaagtccattcaaacg
gccttccaggaagtcgccgatggcctggccgcgcgccagacctacaccgagcagttgcag
gcgcagcgtgacttcgttcaggccaaccaggactactaccgtctggccgagcgtcgctac
cgcattggcgtcgacagcaacctgaccttcctcgatgcccagcgtcagctgttcagcgcc
caacaggccctgatcaccgaccgcctcgcgcagctgaccagtgcggtcaacctgtacaag
gccctgggcggtggctggaatgcgcaaaccgcgcagaacgagccgctgaaagaagaagcg
ccaaagatgaagttgttctga
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