Pseudomonas sp. HS6: JJN09_16025
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Entry
JJN09_16025 CDS
T09971
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs01501
beta-Lactam resistance
pshs01503
Cationic antimicrobial peptide (CAMP) resistance
pshs02020
Two-component system
pshs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JJN09_16025
09132 Signal transduction
02020 Two-component system
JJN09_16025
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JJN09_16025
01503 Cationic antimicrobial peptide (CAMP) resistance
JJN09_16025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_16025
02044 Secretion system [BR:
pshs02044
]
JJN09_16025
01504 Antimicrobial resistance genes [BR:
pshs01504
]
JJN09_16025
Transporters [BR:
pshs02000
]
Other transporters
Pores ion channels [TC:
1
]
JJN09_16025
Secretion system [BR:
pshs02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JJN09_16025
RTX toxin transporter
JJN09_16025
Multiple protein transporter
JJN09_16025
RaxAB-RaxC type I secretion system protein
JJN09_16025
Antimicrobial resistance genes [BR:
pshs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JJN09_16025
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JJN09_16025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Malate_DH
Cas6b_C
Motif
Other DBs
NCBI-ProteinID:
UQS12737
LinkDB
All DBs
Position
3551794..3553227
Genome browser
AA seq
477 aa
AA seq
DB search
MLRKLSLAVAVSCASNAMVWAAEAPLSTKTDLVSVYHEAVDNNADLAAARAQYGAQKEVV
PQARAGLLPNLSGGAETANVRTSIDQPSAIANRSAHSYQATLAQPLFRADRWFQYQAAKD
VNEQAALQLSATEQNLILQSAEDYFNVLRSQDNLASTKAEEAAFKRQLDQSNERFDVGLS
DKTDVLQSQASYDTARANRIVAQRQVDDAFEALITLTNRQYNSIQGIVHTLPILPPAPND
AKAWVDTAARQNLNLLASNFAVSSAEQTLKQRKAGHLPTLDAVAKYEKGDNDALGFANPN
AFGTPYSGNVEQSTVGLQLNIPIYSGGLTSSQVRQSYAQLDQSEQQRESLRRQIVENTRN
LHRAVNTDVEQVQARRQSIISNQSAVEATEIGYQVGTRNIVDVLDAQRQLYTSVRNYNNT
RYDYILDNLRLKQAAGTLNPGDLQDLTRYLKADYNPDKDFLPPDLAKAAEEQLKARP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcaaactctcactggctgttgccgtgtcttgtgcgtccaacgctatggtctgg
gcagcagaagcgcccttgtcgaccaagaccgatctggtcagcgtctatcacgaagcggtc
gacaacaacgccgatctggccgccgcccgcgcccagtacggtgcccagaaagaagtggtg
cctcaggcccgcgccgggctgctgccgaacctctccggcggcgccgaaaccgccaacgtg
cgcacctcgatcgaccagccttcggccatcgccaaccgcagcgcccactcctatcaggcg
acactggctcagccgctgttccgcgccgatcgctggttccagtaccaggccgccaaggac
gtcaacgaacaggccgcgctgcaactctcagccaccgagcagaacctgatcctgcaatcg
gccgaagactacttcaacgtcctgcgcagccaggacaacctggcctcgaccaaggctgaa
gaagcggcgttcaagcgccagctcgaccagtccaacgagcgcttcgacgtgggcctgtcg
gacaagaccgacgtgctgcaatctcaagccagttacgacaccgcccgtgccaaccggatc
gttgcccagcgccaggtcgatgatgcattcgaagcgctgatcaccctgaccaaccgtcag
tacaactcgatccagggcatcgtccacaccctgccgatcctgccgccggcgccaaacgac
gccaaggcctgggtcgacactgccgccagacagaatctcaatctgctggccagcaacttt
gcggtgagctccgccgagcaaacgctgaaacagcgcaaggccggtcacctgccgacgctg
gacgccgtggccaagtacgaaaaaggcgacaacgacgccctcgggtttgccaacccgaat
gccttcggtacaccgtacagtggcaacgtcgagcagagcaccgtaggcctgcaactgaat
attccgatctacagcggcgggctgaccagctcccaagtgcgccagtcctacgcgcaactg
gatcagagcgagcagcagcgcgaaagcctgcgccggcagatcgtggagaacacccgcaac
ctgcaccgcgcggtgaacaccgacgtcgagcaggtgcaggcgcgccgccagtcgatcatc
tccaaccagagcgcggtggaagccacggaaatcggttatcaggtgggaacgcgcaacatc
gtcgacgtgctcgacgcccagcgtcagctctacacctcggtgcgcaattacaacaacacc
cgctacgactacattctcgacaacctgcgcctgaagcaggccgcgggcaccttgaacccg
ggcgacctgcaggacctgactcgctatctgaaggccgactacaacccggacaaggatttc
ctgccgccggatctggccaaggccgccgaagaacagctcaaggcccggccttaa
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