Pseudomonas sp. MT-1: MT1_1643
Help
Entry
MT1_1643 CDS
T10396
Name
(GenBank) RND-family efflux transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
psmt Pseudomonas sp. MT-1
Pathway
psmt01501
beta-Lactam resistance
psmt02024
Quorum sensing
Module
psmt_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
psmt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MT1_1643
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
MT1_1643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psmt02000
]
MT1_1643
01504 Antimicrobial resistance genes [BR:
psmt01504
]
MT1_1643
Transporters [BR:
psmt02000
]
Other transporters
Pores ion channels [TC:
1
]
MT1_1643
Antimicrobial resistance genes [BR:
psmt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
MT1_1643
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
MT1_1643
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
MT1_1643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF4332
Putative_PNPOx_2
DUF6586
Motif
Other DBs
NCBI-ProteinID:
BAP78821
LinkDB
All DBs
Position
complement(1810255..1811733)
Genome browser
AA seq
492 aa
AA seq
DB search
MPRFAPLLLISALTGCQLAPSHEPPPSPTAAQYPADYQPMDGEVLANEIGWREFLEDPRL
ELYIETALQRNRDLQIAVARIEEARGQFGVQGADRYPTLAATADASRGRFPTGSAGRGSA
GGATSGTSSGQITEQFSVGLGISAFELDFWGRVRNLTEAARAQYLSTIEAQRAFRLSLIA
DVALTYLAVRGAEARIELAEATLQSRRDGLRIARVRFEAGITSALDLNQAQALLTQAKTE
LASLHLVRAEQVNYLTQLIGGPLQQPLPEPLPLNEQIEPLRLDAGLPSELLLVRPDILGA
ELDLRAARANIGVARAAFFPQISLTGSFGYISNELDNLISRDNRTWSIGPSLYLPLFDFG
RNRGNLTVAEARENAAVAQYESAIETAFREVADALAGRRWLAEQVAAQAENVATLRRIAD
LARERYAEGVVNYLQVLDAERNLFDAEQAFIQVKRAQIQNLVSLYIALGGGTESPSPAVP
TDTTQRAATSGR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggtttgcgcccttgctgctgatcagcgccctgacgggctgccagcttgcgccg
tcccatgagccaccgccctcgcccaccgctgcgcagtacccggcggactatcagcccatg
gacggcgaggtgttggccaacgagatcggctggcgcgagtttcttgaagacccacgcctc
gagctgtacatcgaaacggcgctgcagcgaaatcgggacctgcagatcgccgtagcccga
attgaagaggcccgcggccagttcggtgtacaaggcgccgaccgctacccgacgctggcc
gcaacggccgatgccagccgtggccgctttccaaccggtagtgccggtcgcggctccgca
ggcggtgcgacctcgggaacatcgagtggccagatcactgagcaattctccgtaggactc
ggtatctcagcgttcgaactcgatttctggggacgggtgcgcaaccttaccgaggctgcg
cgcgcgcaatacctgtcgaccatcgaggcacagcgggccttccgactctcgttgatagcc
gacgtggccttgacctacctcgctgtgcgtggcgctgaggcgcgcatcgaactggccgaa
gcgaccctgcaaagccgccgcgacggcctgcgcattgcccgcgtgcgcttcgaggccggg
atcacctcggccttggatctgaaccaggcacaggcgctgctgacccaggccaagaccgag
ctggccagcctgcacctggtccgagccgagcaggtcaactacctcacccagctgataggg
gggccgctgcaacagccgttgccggagccgctaccgctgaacgaacagatcgaaccgctg
cgcctggatgcggggctaccgtcggagctgttgctggtacgcccggacattctgggcgcc
gagctggacctgcgtgcggcccgcgccaacatcggcgtggcgagagcggcgttcttcccg
cagatctcgctgactggcagcttcggctatatctccaatgagctggacaatctgatcagc
cgcgacaatcgcacctggagtatcggcccaagcctctacctcccgctgttcgacttcggc
cgcaaccgcggcaacctgaccgtcgccgaagcacgggaaaacgcggcggtggcgcagtac
gaaagcgccatcgaaaccgcctttcgcgaggtagccgatgcattggcaggccgccgctgg
ctcgcagagcaggttgccgcgcaagcggagaacgtcgccacgctgcgccgtattgccgac
ctcgcccgtgaacgctacgccgaaggcgtggtgaactaccttcaggtgctcgatgcagag
cgcaacctgttcgatgccgaacaggcgtttattcaggtcaagcgtgctcagattcagaac
ctggtgagcctgtacatcgcgctgggtggcggtaccgagagtccatcgcccgcagtacca
accgatacgacgcagcgggccgcgacctctggtcgctaa
DBGET
integrated database retrieval system
