Pseudomonas sp. ML2-2023-6: V6L79_23055
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Entry
V6L79_23055 CDS
T10713
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
psmz Pseudomonas sp. ML2-2023-6
Pathway
psmz01501
beta-Lactam resistance
psmz02024
Quorum sensing
Module
psmz_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
psmz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6L79_23055
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6L79_23055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psmz02000
]
V6L79_23055
01504 Antimicrobial resistance genes [BR:
psmz01504
]
V6L79_23055
Transporters [BR:
psmz02000
]
Other transporters
Pores ion channels [TC:
1
]
V6L79_23055
Antimicrobial resistance genes [BR:
psmz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
V6L79_23055
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
V6L79_23055
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
V6L79_23055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WWT66101
LinkDB
All DBs
Position
complement(4971237..4972748)
Genome browser
AA seq
503 aa
AA seq
DB search
MQRRISRELKALSVLALSLALNGCIGFGGIGPKDAMLPANTLATDEAIQSAAKDANWPKA
QWWHAYGDPQLDQWITLAVQGSPTMAMAAARVRQARALAGVAESAESLQINGESTLKRHN
WPSDPFYGPGALDNTTTWDNNAALGFSFALDLWGRESNATEQAVDMAHMSVAEGRQAQLE
LQNNVIRAYIQLSLHYAQLDIVESTLRQQEQILDLAQKRLDGGIGTHFEVSQAQAPLPEI
HRQIDAQEEEIALTRNQLAALAGKGPGEGAGLKRPTLALNTALKLPSALPAQLLGQRPDV
VASRWEVAAQARGIDVAHAGFYPNVDLVGSIGFMATGGSALGFLTGKKLNYNVGPAISLP
IFDGGRLRSELGVASGGYDMAVARYNQTLVTALKGISDQLIKRESMEKQQVFAAESVAAA
QKTYDIAMVAFQRGLTDYLNVLNAQTLLFKQQQIQQQVQAARLSAHAELVTALGGGLGAG
FDVPKDDRYVPDKPPAVMALFNH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgtcgcatcagcagagagcttaaagccctcagtgttctggctttatcgttagca
ttaaatggctgcattggtttcggcggcattggtcccaaagacgcaatgttacctgccaat
accctggccaccgacgaggcgatccaaagcgccgcgaaagatgcaaactggcccaaagcc
caatggtggcacgcttacggcgacccgcaactggatcaatggatcactctggcggtacag
ggtagcccaaccatggccatggctgctgcccgtgtacgtcaggccagggctctggcgggc
gtcgccgagtcggctgagtcactgcaaatcaatggcgaatcgaccctcaaacggcacaat
tggccgtctgacccgttttacggtccgggcgcgctggacaacaccaccacctgggacaac
aacgccgcgttgggcttcagctttgcactggacctgtggggccgcgaaagcaatgccacc
gaacaggccgtggacatggcgcatatgagcgtcgccgaagggcgccaggcccagctcgaa
ttgcagaacaacgtcattcgcgcctatatccagttgtcgctgcattacgctcagctcgac
atcgtcgagtcgaccttgcgtcagcaagagcagattctcgacctggcgcaaaagcgtctg
gacggtggcatcggtacgcattttgaagtcagccaggcgcaggcgccgctgcccgaaatt
catcgccagatcgatgcccaggaagaagaaattgccctgacccgcaaccagttggcggcg
ttggccggtaaaggcccgggcgagggcgccggtctgaagcgcccaaccctggctctgaat
accgcgctcaaattgccctcggccttgcccgcacaactgctgggtcagcgcccggacgtg
gtcgccagccgttgggaagtagcggcccaggcccggggcatcgatgtggcccatgctggt
ttttatcccaacgtcgatctggttggcagcattggttttatggccaccggtggcagcgcg
ctgggctttttgaccggcaagaagctcaactacaacgtcggcccggcgatctcgctgccg
atttttgatggcggccgcctgcgttcggagctgggcgtggcatccggcggttatgacatg
gccgtggccaggtacaaccagacactggtgactgcactcaagggtatttccgatcagttg
atcaaacgcgagtcgatggaaaaacagcaggtgttcgccgccgagtcggttgctgccgcg
cagaaaacctacgacatcgccatggtcgcgtttcagcgcgggcttaccgattacctcaac
gtactgaacgcgcaaaccctgttgttcaagcagcagcaaatccagcagcaggttcaggcc
gcccgcctgagcgcccatgccgagcttgttactgcattgggcggcggtcttggggctggc
tttgatgtgcccaaagatgaccgctatgtccccgacaaacccccggccgtcatggcgctg
ttcaatcactaa
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