Pseudomonas sp. NS1(2017): CI807_26065
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Entry
CI807_26065 CDS
T11105
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns01501
beta-Lactam resistance
psns02024
Quorum sensing
Module
psns_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CI807_26065
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CI807_26065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psns02000
]
CI807_26065
01504 Antimicrobial resistance genes [BR:
psns01504
]
CI807_26065
Transporters [BR:
psns02000
]
Other transporters
Pores ion channels [TC:
1
]
CI807_26065
Antimicrobial resistance genes [BR:
psns01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CI807_26065
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CI807_26065
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
CI807_26065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
SIKE
Motif
Other DBs
NCBI-ProteinID:
ASV39525
UniProt:
A0A223VW22
LinkDB
All DBs
Position
5590066..5591484
Genome browser
AA seq
472 aa
AA seq
DB search
MRLRLKPLAALMLLALQGCSMAPAYKVPSVDLPAGYREQTSDGPWHSAQPSDQLAPEWWT
LYQDSHLNDLQQQLLKANPDLAAALAHFDASQAYASQLHAGLFPQITASAQPLRQRQSDS
RPLRGDTQPSVYNSNTAGFSLSYDLDLWGKIRNQVAAGDAQAQASGDDLAVARLSLQHQL
ATLYVQLNGLDAQARILNSSLADFGQALQLTRSRYEGQIASELDLTRAQNQLAEAKAQWD
EVRGQRNLTEHAIGELVGVAASDFSLPPSPQLIALPGIPSQLPSHLLQRRPDIAAAERRV
FAANANIGVAKAAWYPDFSLTGLIGGQTQGVGNLLSAGNRYWALGPLVNLPIFDGGRLSA
NERQAKAEFEEASAQYRSQVLKAVREVEDNLAQLRDLQQEAQDEQAAADAAQHTQALAMN
SYQAGAVSYLDVVTAQSAALQAQRTLQAVQTRQLQASVGLVTALGGGWQPSS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctaaggcttaaacccctggcagcgctgatgctgctggcattgcagggctgctcg
atggcgccggcctacaaggtgccgagtgttgatttgcccgccggctaccgcgaacagacc
agcgatggcccctggcacagcgcgcaaccgtccgatcaactggcccccgaatggtggacg
ctctaccaggattcgcacctgaatgacctgcaacagcaactgctcaaggccaaccccgac
ctggcggcggcgctggcgcacttcgatgcgtcccaggcctatgccagccagttgcatgcg
gggttgttcccgcagatcaccgccagcgcgcagccgttgcgccagcgccaatcggactcg
cggccgctgcgaggggatacgcagccatcggtatacaacagcaataccgcagggttttca
ctgagttacgacctggacctgtggggcaaaatccgcaaccaggtggcggccggtgatgcc
caggcacaggcgtccggcgatgatttggcggtggcgcgcttgagcctgcagcatcagttg
gcgacgttgtacgtgcagctcaacgggctggatgcgcaggcgcggattctcaacagttcg
ctggcggatttcggccaggcgttgcaactgacccgtagccggtatgaggggcagattgct
tcggagctggacctcacgcgcgcgcagaatcaactggccgaggccaaggcgcaatgggat
gaagtgcgcgggcaacgcaatctgaccgagcacgcgataggagaactggtgggtgtggca
gccagcgatttttcattgccgcctagcccgcaattgatcgccttgccggggatcccttcg
caattgcctagccacctactgcaacgtcgtccggacattgcagcggccgagcgacgagta
tttgccgccaacgccaacatcggtgtggccaaggcggcgtggtatccggatttcagtctg
acggggttgattggcgggcagactcagggggtcggcaacctgctgtccgcgggcaatcgc
tattgggcattggggccgttggtgaatttgccgatcttcgacggcggtcgcctaagcgcc
aacgaacgccaggccaaggccgagtttgaagaggcgtcggcgcagtaccgcagccaggtg
ctgaaagccgtgcgcgaagtcgaggacaacctggcacaattgcgggatctgcagcaggaa
gcacaggatgaacaagcggcagcggatgcagcgcagcacacgcaagcgctggcgatgaac
agctatcaggcaggggccgtgagttacctggatgtggtgacggcgcagtcggcggcgtta
caggcgcagcggacattacaggcggtgcagacaaggcagttgcaggcgagtgtcgggctg
gtgaccgcgctgggtggcggctggcaaccctcttcctga
DBGET
integrated database retrieval system
