KEGG   PATHWAY: psoa04146
Entry
psoa04146                   Pathway                                
Name
Peroxisome - Pseudomonas solani
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
psoa04146  Peroxisome
psoa04146

Other DBs
GO: 0005777
Organism
Pseudomonas solani [GN:psoa]
Gene
PSm6_01490  nudC; NADH pyrophosphatase [KO:K03426] [EC:3.6.1.22]
PSm6_02550  [KO:K01796] [EC:5.1.99.4]
PSm6_02580  [KO:K01897] [EC:6.2.1.3]
PSm6_07770  [KO:K01897] [EC:6.2.1.3]
PSm6_27380  [KO:K03781] [EC:1.11.1.6]
PSm6_28520  [KO:K01897] [EC:6.2.1.3]
PSm6_32200  sodA; superoxide dismutase [Mn] [KO:K04564] [EC:1.15.1.1]
PSm6_33220  sodB; superoxide dismutase [Fe] [KO:K04564] [EC:1.15.1.1]
PSm6_35950  fadD2; long-chain-fatty-acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
PSm6_35960  fadD1; long-chain-fatty-acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
PSm6_38710  [KO:K00803] [EC:2.5.1.26]
PSm6_44970  liuE; 3-hydroxy-3-isohexenylglutaryl-CoA/hydroxy-methyl glutaryl-CoA lyase [KO:K01640] [EC:4.1.3.4]
PSm6_47120  [KO:K03781] [EC:1.11.1.6]
PSm6_47500  icd; isocitrate dehydrogenase [NADP] [KO:K00031] [EC:1.1.1.42]
PSm6_48410  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
PSm6_54500  katB; catalase [KO:K03781] [EC:1.11.1.6]
PSm6_54920  fadD; long-chain-fatty-acid--CoA ligase [KO:K01897] [EC:6.2.1.3]
PSm6_60070  [KO:K01897] [EC:6.2.1.3]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
psoa00071  Fatty acid degradation
psoa00230  Purine metabolism
psoa00564  Glycerophospholipid metabolism
psoa00565  Ether lipid metabolism
psoa00900  Terpenoid backbone biosynthesis
KO pathway
ko04146   

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