Pseudomonas savastanoi pv. phaseolicola 1448A: PSPPH_3014
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Entry
PSPPH_3014 CDS
T00266
Name
(GenBank) transcriptional regulator, LysR family
KO
K18297
LysR family transcriptional regulator, mexEF-oprN operon transcriptional activator
Organism
psp
Pseudomonas savastanoi pv. phaseolicola 1448A
Module
psp_M00641
Multidrug resistance, efflux pump MexEF-OprN
psp_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
psp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psp03000
]
PSPPH_3014
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
psp01504
]
PSPPH_3014
Transcription factors [BR:
psp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSPPH_3014
Antimicrobial resistance genes [BR:
psp01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PSPPH_3014
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
PSPPH_3014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AAZ34064
UniProt:
Q48HE0
LinkDB
All DBs
Position
3499946..3500875
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AA seq
309 aa
AA seq
DB search
MNRNELRKADINLMVVFETLMQERNVTRAAEKLFLGQPTISAALNRLRNLLNDPLFIRVG
HRMEPTARAHEILKHLTPALDAMSTALSLTTDFDPSVSKMTFRIGLTDDVEFGLFPAMLK
AIREEAPGVVIVVKHVDYLNISEVLMSGDITVGVCLTRELPANAKRKTLRNVQPRLVRAD
KPRSPMSIDEYCSRPHVVVSHVASISSFADEWLTALGRKRQVVLSVPQFATLLALMAGTD
MISGLSDYAAKAMSALGLLYDEPLPFPTAGLDLSMTWLSVMDSDPAERWLRSRIEEFMGG
RQEAPALAG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaaatgaactgcgcaaggccgacatcaacctgatggtggtcttcgagacatta
atgcaggagcgtaacgtcacccgggcagccgaaaagctgtttctcggccaacccacgata
agcgccgcactgaatcgcctgcgcaacctgctcaatgacccgttgttcatccgcgtcggg
catcgtatggagccgaccgcgcgcgcccatgagattctcaagcacctgacgccagcgctg
gatgccatgtctaccgcgctgagcctgaccaccgatttcgatccttcggtcagcaagatg
acgtttcgcatcggcctgaccgacgacgtcgaattcggcctgtttcccgccatgctcaag
gccatccgcgaggaggcgcctggcgtggtgatcgtggtcaagcacgtcgactacctgaat
atctccgaagtgctgatgtccggcgacatcaccgtcggcgtctgcctgacccgtgagctg
ccggccaatgccaaacgcaagacgctgcgcaacgtgcagccacggctggtacgcgccgac
aaaccgcgcagtccgatgagcatcgacgagtattgttcacgacctcatgtggtggtgtcg
cacgtggccagcatcagcagctttgccgatgagtggctgaccgcactgggtcgcaagcgt
caggtcgtgttgtcagtgccgcagttcgccacattgctcgcactgatggctggcaccgac
atgatttcgggcctgtccgactacgcggccaaggccatgagcgcattgggtttgctgtat
gacgagccgttgcccttccccacggcggggctggacctgtcgatgacgtggctgagtgtg
atggacagcgaccctgccgagcgttggctgcgcagcaggatcgaggaattcatgggcggg
cgccaggaagcgcccgccctggcaggctga
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integrated database retrieval system
