Polyodon spathula (Mississippi paddlefish): 121320508
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Entry
121320508 CDS
T07273
Name
(RefSeq) caspase-3-like
KO
K02187
caspase 3 [EC:
3.4.22.56
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04115
p53 signaling pathway
pspa04148
Efferocytosis
pspa04210
Apoptosis
pspa04623
Cytosolic DNA-sensing pathway
pspa05132
Salmonella infection
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121320508
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121320508
09143 Cell growth and death
04210 Apoptosis
121320508
04115 p53 signaling pathway
121320508
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121320508
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121320508
09171 Infectious disease: bacterial
05132 Salmonella infection
121320508
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121320508
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.56 caspase-3
121320508
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C14: caspase family
121320508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C14
DUF6455
LBP_C
Motif
Other DBs
NCBI-GeneID:
121320508
NCBI-ProteinID:
XP_041114836
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All DBs
Position
1:61177152..61186467
Genome browser
AA seq
290 aa
AA seq
DB search
MAETKDLKEDLKSGGDAVDANPVTVKETIEQPQDEDMQGDVKPDHAHPYRYNMNYPSIGQ
CVIINNKNFDRKTEMNTRNGTDVDEENLSSYFKMQGYEVKVFKDQTCRQIEQCLQSIAKE
DHSKEASFVCALLSHGDEGVIYGTDGCIEIKKLTSFFKGHNCKTLVGKPKLFFIQACRGT
ELDGGIEADSIESDSSPMRIPVEADFLYAYSTAPGYYSWRNNVSGSWFIKSLCDMLSKYG
RELELMQILTRVNHKVALEFESSSYIPGFNEKKQIPCIVSMLTKEVHFSH
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacaaaggacttaaaagaagatcttaagtctggaggagatgcggtagatgct
aatcctgttactgtaaaagagaccattgagcagccccaagatgaagacatgcagggggat
gtcaagccagaccatgcacacccctacagatataacatgaactatccaagcatcggccaa
tgtgttatcattaacaacaagaactttgatagaaagacagaaatgaatactcgaaatgga
acagatgtggatgaagaaaatctctccagttatttcaaaatgcagggttatgaagtaaag
gttttcaaagaccagacctgcaggcagattgagcaatgtttacaatcgattgccaaggaa
gaccacagcaaagaggcctcttttgtgtgcgcgctgctgagccacggagatgaaggggtg
atttatggaacggacggttgtatcgaaatcaaaaaattgaccagctttttcaagggacac
aactgcaagacattggttggcaagcctaaattgtttttcatacaggcttgtagaggaacg
gagctagatggaggtattgaagccgacagtattgaaagtgacagctctcccatgaggatc
cctgttgaggctgacttcttgtacgcgtactccactgctccaggctactattcctggaga
aacaatgtgagtggctcctggttcatcaagtctctgtgtgatatgctgagcaagtacggc
agggagctggagctcatgcaaatccttacacgggtcaaccacaaggtggcactggagttt
gagtcatcctcatacattccaggcttcaatgagaaaaagcagattccgtgcatcgtctct
atgttaaccaaagaggtgcatttctcacattaa
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