Polyodon spathula (Mississippi paddlefish): 121329636
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Entry
121329636 CDS
T07273
Name
(RefSeq) exostosin-2-like
KO
K02367
glucuronyl/N-acetylglucosaminyl transferase EXT2 [EC:
2.4.1.224
2.4.1.225
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
pspa01100
Metabolic pathways
Module
pspa_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
121329636
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121329636
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
121329636
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
121329636
Glycosyltransferases [BR:
pspa01003
]
Glycan extension
O-Glycan
121329636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
121329636
NCBI-ProteinID:
XP_041131264
LinkDB
All DBs
Position
17:8371748..8413256
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AA seq
719 aa
AA seq
DB search
MCASVKYSARGPALIPRMKTKHRIYYIALFSVVLLGLIATGMFQFWPHSIESTADWSVER
RSVHDSPLVHLPASSPIPERGDLSCRMHTCFDVYRCGYNPKNRIKVYIYPLHRYVDELGT
PISSTGLSREYNELLSAISDSEFYTDDVSRACLFIPSIDVLNQNSLRIRETAQALAQLHR
WDRGMNHLLFNMLPGGPPEYNTALDVPRDRALLAGGGFSTWTYRQGYDVSIPVYSPLSAE
VELPKKQPGPRPYFVLSSQTAVHMEYRAELEALKAENGEAVLILDKCTNLSEGVSPTRKR
CYRGQVYDYPQTLQESTFCVVLRGARLGQAVLSDVLQAGCVPVIIADSYILPFSEVLDWK
RALVVIPEDKLSEMYSILKSIPQRQVEEMQRQAHWLWEAYFSSMKAIALATLQIINDRIY
PYAARSYEQWNDPSVVKWSSVNSPLFLPLIPPRSPGFTAVVLTYDRVESLFRVITEISKV
PSLSKLLVVWNNQNKSPPEESFWPKISVPLKVVRTTENKLSNRFFPYDEIETEAVLAIDD
DIIMLTSDELQFGYEVWREFPDRLVGYPGRLHLWDHEMSKWKYESEWTNEVSMVLTGAAF
YHKYFNYLYTYKMPGDIKNWVDAHMNCEDIAMNFLVANVTSKAPIKVTPRKKFKCPECTA
IDGLSLDQTHMVERSECINKFASVFGMMPLKVVEHRADPVLYKDDFPEKLKSFPNIGSL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcgtcggtgaagtatagtgccagagggcctgcactaatcccgcggatgaagacc
aaacaccggatctactatatagcactgttctctgtggtgctgctgggcctcatcgccacc
ggcatgttccagttctggccgcactccatcgagtcgacggcagactggagcgtggagcgc
cgcagcgtgcatgactcgcccctggtgcacctgcctgcctccagccccatcccagagcgt
ggggacctcagctgccgcatgcacacctgctttgacgtgtaccgctgcggctacaacccc
aagaacaggatcaaggtgtatatctaccccctgcaccgctatgtggatgagctgggcact
cctatcagcagcactgggctctcgcgggagtacaacgagctgctgagcgccatctccgat
agcgagttctacactgacgatgtgagccgagcctgcctcttcatcccctccatcgatgtc
ctgaaccagaactcgctacgcatccgtgagactgctcaagcactggcacagctgcacaga
tgggacagggggatgaaccacctgttgtttaatatgttacctggagggcccccagagtat
aacactgcactggatgttcccagagacagggctctgctggctgggggagggttctcaaca
tggacctatcggcagggctatgatgtcagcatccctgtctacagccccctatctgccgaa
gtggagttaccaaagaagcagcctggcccgcggccgtactttgtgctgtccagtcagact
gcggttcacatggagtaccgtgccgagctggaggctctgaaggctgagaacggggaggca
gttctgatcttggacaagtgcaccaacctgtctgagggggtctcccccaccaggaaacgc
tgctacaggggccaggtctacgactatccccagacactgcaggagtctacgttttgcgtg
gttctgcgtggggctcgtctcggccaggctgtgctcagtgatgtgctgcaggcaggctgt
gtgcctgtcataatcgcagactcatacatcttgcccttctccgaagtactcgactggaaa
agggcgttggtggtgattcctgaagacaagctgtctgagatgtacagcattctgaagagc
atcccgcagagacaggtggaggagatgcagagacaggcacactggttgtgggaggcctac
ttcagctccatgaaggcgattgccttggcaacacttcagatcattaatgaccgtatctac
ccctatgctgcccggtcctacgagcagtggaatgacccatctgttgtgaagtggtcgagt
gtgaacagccccttgttcctacccctgatccctcctcgttcccccggctttaccgctgtg
gtgctcacctacgaccgtgtcgaaagtctgttccgggtcatcactgagatctccaaggtg
cccagtctgtccaagctgctggtggtgtggaacaaccagaacaagagcccccctgaggag
tctttttggccgaagatctcagtgcccctgaaagtggtgcggacgacagagaacaagctg
agtaatcgtttcttcccctatgatgagattgagacggaggctgtgctggccatcgatgat
gacatcataatgctgacctctgacgagctgcagtttggctatgaggtgtggcgggagttt
cccgacagactggtagggtatccgggtcggctccacctctgggaccacgagatgagcaag
tggaagtacgagtcagaatggaccaacgaggtctccatggtgctgactggagcagctttt
taccacaagtactttaactacctgtacacatacaagatgcctggtgatatcaagaactgg
gtggatgcccacatgaactgcgaagacattgctatgaacttcctcgtggccaacgtcact
agcaaagcccctattaaggtgacccctcgtaagaagttcaagtgcccggagtgtacagct
attgatgggctgtcgctggaccagactcacatggtagagaggtctgaatgcatcaacaag
tttgcttctgtgttcgggatgatgcctctgaaagtggtggaacatcgggctgaccctgtc
ctgtacaaggatgacttcccagagaaactcaagagcttccctaacattggcagtctctaa
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