Pseudogemmatithrix spongiicola: Strain318_000938
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Entry
Strain318_000938 CDS
T10301
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pspc Pseudogemmatithrix spongiicola
Pathway
pspc01501
beta-Lactam resistance
pspc01503
Cationic antimicrobial peptide (CAMP) resistance
pspc02020
Two-component system
pspc03070
Bacterial secretion system
Brite
Transporters [BR:
pspc02000
]
Other transporters
Pores ion channels [TC:
1
]
Strain318_000938
Secretion system [BR:
pspc02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Strain318_000938
RTX toxin transporter
Strain318_000938
Multiple protein transporter
Strain318_000938
RaxAB-RaxC type I secretion system protein
Strain318_000938
Antimicrobial resistance genes [BR:
pspc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Strain318_000938
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Strain318_000938
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WKW14591
UniProt:
A0AA49Q7B2
LinkDB
All DBs
Position
complement(1051265..1052608)
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AA seq
447 aa
AA seq
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MRLLLSFLLAASVSAAAHAQVAAGGTLTLEQALDIASRNNPAYQQAVLGRTRAQAQVRSA
YGNFLPSADGSFSLGFREGRPQNFGGINIGATSDILSSSWNLSARSGLSWNTFNQIKRAN
AGLDAADADVAAARFNLRAQVTQQFLLALQTQARAAFQDTLVSQQRLQLELAQARAGVGT
LTSLDVKRAEVGLGQQEVAALRARNTAEVAKLQLFQQLGVAMPAGLTLLADLPMSAPTFT
AEDLMTQARAANPTLKAVQARERVAVAGLRSARGEYTPTLNFSANVSAFTQKVVDLPPTA
TPGQIAENRRYPFDFTRNPYSLSMGLSLPIFDGLGRESRLQEANAAREEAVYSVRRQELQ
LTADVTSAFVSLQAAFQAAELQARNATTAREALQLAEERYRVGASTFVDLTTARAEYERA
ETDRIDAVYEYHRAYAALENAVGRTLR
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctcctgtccttcctgctcgccgcgtcggtcagcgcggccgcccacgcccaa
gtggcggccggcggcaccctgacgctcgaacaggctctcgacatcgcctccaggaacaac
cctgcctatcagcaagcggtgctggggcggacccgcgcccaggcgcaggtccgttcggcg
tacggcaacttcctgccgagtgccgacgggtcgttcagcctcggattccgcgagggccgc
ccgcagaacttcggcggcatcaacatcggcgccacctcggacatcctctcgtcctcgtgg
aacctgtcggcccgcagcgggctgtcgtggaatacgttcaaccagatcaagcgggccaac
gccggcctcgacgcggcagacgccgacgtggccgccgcgcgcttcaatctccgcgcccag
gtgacgcagcagttcctgcttgcgctgcagacgcaggcgcgtgccgcgttccaggacacg
ctcgtatcgcagcagcggctccagctggagctggcgcaggcgcgcgccggcgtcggtacc
ctcacgtccctcgacgtcaagcgcgccgaagtcggcctcggccagcaggaagtggcggcg
ctccgcgcccgcaacaccgcggaggtcgcgaagctccagttgttccagcagctcggcgtg
gccatgccggccggcctgacgctgctcgcggacctgccgatgtcggccccgaccttcacg
gccgaggacctcatgacgcaggcgcgtgccgccaacccgacgctcaaggccgtccaggcc
cgcgagcgcgtggcggtcgcgggactgcgcagtgcccgcggcgagtacacgccgaccctc
aacttcagtgccaacgtctcggcgttcacgcagaaggtcgtggacctgccgccgacggcg
acgcccggccagatcgccgagaaccgccgctatccgttcgacttcacgcggaacccgtac
agcctctcgatggggctgtcgctgccgatcttcgacgggctcggccgcgagtcgcgcctg
caggaggccaacgccgcgcgcgaagaggccgtctacagcgtgcgccggcaggagctgcag
ctaacggcggacgtgacctcggcgtttgtctcgctacaggcggccttccaggccgccgag
ctccaggcgcgcaatgcgaccacggcgcgcgaagcgctgcagttggccgaggagcggtat
cgggtcggggccagcaccttcgtggacctgacgacggcgcgcgccgagtacgagcgcgcg
gagacggatcgcatcgacgcagtctatgaataccaccgggcgtacgcggcgttggaaaac
gccgtcggccgcacccttcgctga
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