Pseudomonas sp. RU47: CCX46_04785
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Entry
CCX46_04785 CDS
T11150
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
psru Pseudomonas sp. RU47
Pathway
psru01501
beta-Lactam resistance
psru02024
Quorum sensing
Module
psru_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
psru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CCX46_04785
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CCX46_04785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psru02000
]
CCX46_04785
01504 Antimicrobial resistance genes [BR:
psru01504
]
CCX46_04785
Transporters [BR:
psru02000
]
Other transporters
Pores ion channels [TC:
1
]
CCX46_04785
Antimicrobial resistance genes [BR:
psru01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CCX46_04785
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CCX46_04785
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
CCX46_04785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AZZ74478
LinkDB
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Position
1102680..1104179
Genome browser
AA seq
499 aa
AA seq
DB search
MPRRINRALLPLSVLAFTLGLGGCISTEGIAPQGKALEANSLATDDAIAHAARDANWPTA
QWWQAYGDPQLNRWIDLAVQGSPTMAMAAARVRQAKAMAGVAESAESLQINGESTIKRHN
WPTDQFYGPGELANTTTWDNNAALGFSYALDLWGRESNASERAVDLAHMSAAEARLAQLE
LQNNIVRAYIELSLHYAQRDIVAATLKQQQQILDLAQKRLNGGIGTHFEVSQAETPLPET
HRQIDALDEEIALSRNQLAALAGKGPGAGAQLQRPTLSLGAALKLPSALPAELLGQRPDV
VASRWQVAAQARGIDVAHAGFYPNVDLVGSLGYMATGGGALEFLTGKKLNYNVGPAISLP
IFDGGRLRAELGEASAGYDIAVAHYNQTLVNALKNISDQLIRRESMDKQQGFAAESVATA
QKTYDIAMIAYQRGLTDYLNVLNAQTLLFKQQQVQQQVQAARLSAHAELVTALGGGLGAG
NDVPAAEKTQAPKTPALLH
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgtcgcatcaacagagcgcttttgccgctcagtgttctggcttttaccctgggt
cttggcggctgcatctcaaccgaaggaattgccccgcagggcaaggcattggaagccaat
tcactggccaccgacgacgccatcgcccatgccgcccgtgacgccaattggcccaccgcg
caatggtggcaagcctacggtgacccgcaactcaatcgctggatcgacctcgccgtgcaa
ggcagtccgaccatggccatggctgctgcgcgagtgcgtcaagccaaagccatggccggc
gtcgccgaatccgccgagtcattgcagatcaatggcgagtcaacgatcaagcggcacaac
tggccgaccgatcagttctacggtccgggcgagctggccaacaccacgacctgggacaac
aacgccgcgctcggtttcagctacgcgctcgacctctggggccgtgaaagcaatgccagc
gaacgtgcggtggaccttgcgcacatgagcgcggccgaggcgcgattggcgcagcttgaa
ttgcagaacaacatcgttcgcgcctacatcgaactgtcgctgcattacgcccagcgcgac
atcgtcgcggcgacgctcaagcagcaacagcagattctcgatctggcacagaagcgtttg
aatggtggcatcggcacacacttcgaagtcagtcaggccgaaacgccgttgccggaaacc
catcggcaaatcgatgcgctggatgaagagatcgccctgagtcgcaatcaacttgccgcg
ctggcgggtaaagggccgggggcgggcgcgcagttgcagcgcccgacattgtccctcggt
gctgcgctgaaactgccgtcggcattgcccgccgaactgctcggccagcgtccggatgtg
gttgccagtcgctggcaggtcgcggcgcaggcgcgtggtatcgatgtggcgcacgccggt
ttttaccccaacgtcgatctggtcggcagtctcggttacatggccaccggcggtggcgcg
ctggagtttttgaccggcaagaaactcaactacaacgtcggtccggcgatctctttgccg
atcttcgacggtggccgactgcgtgccgaactcggtgaagcctccgccggttacgacatc
gctgtggcgcattacaaccagacgctggtgaatgcgctgaagaatatctccgaccagttg
atccgccgcgagtcgatggacaagcagcaaggttttgccgccgagtcggtggccacggcg
cagaagacttacgacatcgcgatgatcgcgtatcagcgcggcctcaccgattacctcaac
gtgctcaatgcgcagacgttgctgttcaagcaacagcaagttcagcagcaggtgcaggcg
gcgcggttgagtgcgcatgccgagttggtgactgcgctgggtggtggcctcggtgccggc
aacgatgtgccggcggccgagaaaacccaggcaccgaaaaccccggcactcctgcattga
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