Pseudomonas sp. SXM-1: DCC84_10145
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Entry
DCC84_10145 CDS
T11095
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pssx Pseudomonas sp. SXM-1
Pathway
pssx01501
beta-Lactam resistance
pssx02024
Quorum sensing
Module
pssx_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pssx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCC84_10145
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DCC84_10145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pssx02000
]
DCC84_10145
01504 Antimicrobial resistance genes [BR:
pssx01504
]
DCC84_10145
Transporters [BR:
pssx02000
]
Other transporters
Pores ion channels [TC:
1
]
DCC84_10145
Antimicrobial resistance genes [BR:
pssx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DCC84_10145
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DCC84_10145
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DCC84_10145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
Phage_P22_Y8K6
Motif
Other DBs
NCBI-ProteinID:
QBQ10092
LinkDB
All DBs
Position
2155140..2156567
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AA seq
475 aa
AA seq
DB search
MAKRTCLVLVATLGLGACHLAPPLDVPEVPIAAQFHTQGPWTVGTPNDQASRDGWWHIYK
DPQLDAMEQQLLQSNPDLSAALAHYSQAQAFLAQAQSGLFPKLIGSSNAQRIRQSDTRPL
RSASPPNVYDSGTVGVELDYEVDLWGRVRDTVAAGTSDAQAAKADLASVRLSLQAQLADS
YIRLRGIDRQDQLLQETSDAYAKALSLTEGLHGGGIVSGLDVARARTQLSTVKSQLSQNR
VQRAVLEHSIAAMLGESASTYTIAPSVADIALPGVPTGVPSTLLQRRPDIAAAERRIASA
NARIGVAKAAWFPALTLSAQGGFQSDEFAHLLSAPNIFWAIGPSLVGTIFDGGARQAGVD
SAKAATDEAAAKYRGVVLTAFEQVENNLSIISGLDTALVDQRDAAAAAQYAEDLSLARYR
QGGAAYLDVVTAQVASLQAQRTVLDLQTQQLSANVGLIKALGGGWNMAQLAQKNL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcgcacttgcctggtattagtcgcgaccctgggcctgggcgcctgccatctt
gcgccgccgctggacgtgccggaggtacccattgccgcgcagttccatacccagggaccg
tggaccgtcggcacgccgaacgaccaagcaagtcgcgacggttggtggcacatctacaag
gacccgcaactggacgcgatggagcagcagttgctacaaagcaacccggacttgagcgcg
gcactggctcactattcccaggcccaggcgtttttggcccaggcgcaatccgggctgttt
ccaaagctgatcggttccagcaatgcccagcgcattcgccagtcggacacccgcccactg
cgctcggccagcccgccgaatgtttacgattccgggacagtgggggtagagctggactat
gaagtcgacctctggggccgtgtgcgcgacaccgttgccgccggcaccagcgacgcccag
gccgccaaggccgacctggcctcagtgcgtctgagtttgcaggcgcaattggccgacagc
tacatccgcctgcggggcatcgaccggcaagaccagttgctgcaggaaaccagcgatgcc
tatgccaaggctttgagcctgaccgaaggcttgcacggcggcggtatcgtctccggcctg
gacgtggcgcgggcgcgtacccaactgtcgacggtcaagtcgcagctgagccagaaccgg
gtgcagcgtgcagtgcttgaacactcgatagcggcgatgctgggtgagtccgcatcgacc
tacacgattgccccaagcgtcgcggatatcgccttgcccggcgtgcccaccggtgtaccg
tctacgctgttgcagcgtcggccggacatcgccgctgccgagcgccggattgcctcggcc
aatgcgcgcataggggtggcgaaagccgcctggttcccggcccttaccctgagtgcccag
ggaggtttccagagtgatgagttcgcgcacttgttgagcgcgcccaacattttctgggcc
atcggcccgtcgctggtggggacgatttttgacggcggcgcgcgccaggccggggtggac
agtgccaaggcggcaaccgatgaagccgcggccaagtatcgtggtgtagtgttgaccgcg
ttcgagcaggtggagaacaacctgtcgatcatctccgggctcgacaccgccctggtggat
cagcgcgatgcggcggcagccgcgcagtacgccgaggacttgtccctggcacgctatcgc
cagggtggcgcggcgtacctggacgtggtgacggcgcaggtagcgtcgttgcaggcacag
cgcacggtgctggatctgcagactcaacagttaagcgccaacgtagggctgatcaaggca
ctgggtggcggctggaatatggcccaactggcccaaaagaacctgtag
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