Pantoea stewartii subsp. stewartii: DSJ_20520
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Entry
DSJ_20520 CDS
T04970
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
pstw
Pantoea stewartii subsp. stewartii
Pathway
pstw01501
beta-Lactam resistance
pstw01503
Cationic antimicrobial peptide (CAMP) resistance
pstw02020
Two-component system
pstw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pstw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DSJ_20520
09132 Signal transduction
02020 Two-component system
DSJ_20520
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSJ_20520
01503 Cationic antimicrobial peptide (CAMP) resistance
DSJ_20520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pstw02000
]
DSJ_20520
02044 Secretion system [BR:
pstw02044
]
DSJ_20520
01504 Antimicrobial resistance genes [BR:
pstw01504
]
DSJ_20520
Transporters [BR:
pstw02000
]
Other transporters
Pores ion channels [TC:
1
]
DSJ_20520
Secretion system [BR:
pstw02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DSJ_20520
RTX toxin transporter
DSJ_20520
Multiple protein transporter
DSJ_20520
RaxAB-RaxC type I secretion system protein
DSJ_20520
Antimicrobial resistance genes [BR:
pstw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
DSJ_20520
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
DSJ_20520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Ribosomal_S5_C
vRNAP_dom
Motif
Other DBs
NCBI-ProteinID:
ARF51461
UniProt:
H3RA04
LinkDB
All DBs
Position
4114264..4115736
Genome browser
AA seq
490 aa
AA seq
DB search
MKKLLPFFIGLSLGGFSFASQAENLLQVYQQARLSNPDLRSSAATRDAAFEKINEARSPL
LPQLGLGADYTYANGYRDSSGIHSNTTSGSLQLTQTIFDMSKWRALTLQEKAAGIQDVTY
QVAQQDLILNTATAYFNVLKAIDTLSYVEAQKMSIYRELDQTTQRFNVGLVAITDVQNAR
AQYDSVLANEVTARNDLDNAVESLRQITGMDYLALASLDIDRFKTTKPEAVNSLLKQAES
RNLNLLSARLNQDLAREQIRSAEAGHLPTLDLTASTGLSNSKYGGSRAEQNASSTDSITG
NNKVGLSFTLPLYSGGSVTSQVKQAQYNFVSASEQLEAAHRSAVQTVRSSYNNVNASASS
IAAYKQAVVSAQSSLDAMEAGYQVGTRTIVDVLNATSTLYNAKQQLSDARYSYLINQLNI
SYALGTLNEQSLGVLNSQLGKEISTSPETVQPQNVQQVLGEDHISTSETAPAPAPVHKAA
HKSSRNPFSH
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgctcccattttttattgggctgagcctgggcggtttcagcttcgccagc
caggcggaaaacctgcttcaggtttaccagcaagcgcgtttaagcaaccctgatctgcgt
agctctgcggcgacgcgtgatgcggcgttcgagaaaattaacgaagcgcgcagtccttta
ttaccccaactgggtttgggtgcagactatacctacgcaaacggctaccgtgatagtagc
ggtattcactccaataccaccagtggctcgctgcaattgacgcaaaccattttcgatatg
tcaaaatggcgtgcgctgacgctacaggaaaaagcagccggtattcaggatgtgacctac
caggtcgcccagcaggatctgatcctgaacaccgcgacggcctacttcaatgtgctgaaa
gccattgatacgctttcttacgtcgaagcgcagaagatgtcgatttatcgcgaactggat
caaacgacccagcgcttcaacgtgggcctggtcgccatcaccgacgtgcagaacgcccgc
gcgcagtacgacagtgtcctggcgaatgaagtgaccgcgcgtaatgacctggacaacgca
gtggagtctctgcgtcagattaccggtatggattacctggcgctggcgtcgctggatatt
gatcgcttcaaaaccactaaacctgaagcggttaactcgctgcttaagcaggctgaaagc
cgcaacctgaacctgctttctgcccgtctgaaccaggacttagcccgtgagcaaatccgt
tcagcggaggcgggccatttaccgacgctggatctgaccgcctcgactggcctgtccaac
agcaaatacggcggaagccgtgctgagcaaaatgccagctcgacagattccatcaccggc
aacaacaaagtgggcctgagctttaccctgccgctttacagcggtggcagcgtgacctcg
caggtgaaacaggcgcaatacaactttgtcagcgccagtgagcagttggaagccgcgcac
cgttcagccgtgcagaccgtgcgctcgtcttacaacaacgtcaatgcgtcagcaagtagc
attgccgcttacaaacaagccgtggtgtccgcgcaaagttcattagacgcgatggaagcc
ggttaccaggtgggaacccgtaccatcgttgacgtgctgaatgcgacatcaacgctttat
aacgctaagcagcagttgtcggatgcgcgttacagctatctgattaaccagttgaatatc
agctatgccctgggcacgctgaacgagcagagtttgggtgtgcttaacagtcagttaggt
aaagaaatctcaacctcgccggaaacggttcagccacaaaatgtacagcaggtgctgggt
gaagatcacatctccacttccgaaacggcaccagcaccggcccccgtacataaggccgca
cataagagcagccgtaatccgttcagtcactaa
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