Pedobacter steynii: BFS30_23045
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Entry
BFS30_23045 CDS
T04469
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
psty
Pedobacter steynii
Pathway
psty01501
beta-Lactam resistance
psty02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psty00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BFS30_23045
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BFS30_23045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psty02000
]
BFS30_23045
01504 Antimicrobial resistance genes [BR:
psty01504
]
BFS30_23045
Transporters [BR:
psty02000
]
Other transporters
Pores ion channels [TC:
1
]
BFS30_23045
Antimicrobial resistance genes [BR:
psty01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BFS30_23045
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BFS30_23045
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BFS30_23045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DCX2_DCDC1
Motif
Other DBs
NCBI-ProteinID:
AOM79785
UniProt:
A0A1D7QM90
LinkDB
All DBs
Position
5587076..5588485
Genome browser
AA seq
469 aa
AA seq
DB search
MKTYINKLAPIVILALLAGCKVSKDVVIPKASIPENFRNAASADSTSIAALSLKQFFTDA
TLQNLLDTALIRNYDLQIALKNMEAADVLFKQSKLGNLPELNLNITANSNRPSDNSLNGL
SAGQFLKTKHVEDYNANLALSWEADIWGKIRSQKQAALATYLQTAEAKKAVQTRLISNVA
QGYYRLLMMDEQMAVAKRNLALSDSTLRIIHMQFDAGQVTSLAIQQAEAQQLVAAQLIPE
LEQNISIQENALSILAGQLPGALARTASLNKISFPEQLSAGFPSAMVSRRPDVKSAELSL
NISNAQVGIAKAGLYPSLSITASGGLNAFKASNWFNIPASLFGTVAGGITQPIFQRRQLR
TQYETAKINREKTVIQFRQSVLNAVGEVSDELVKIEKLKQQYSIAQNRVSTLQQAVKNAN
LLFKNGMANYLEVITAQSNSLQSELELATIKTAQLNASVELYRALGGGF
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatatataaataaacttgccccgattgtaatactcgcattacttgcaggatgt
aaagtttcaaaagatgtggtaatccctaaagctagcattcctgaaaatttcaggaatgct
gcatcagcagattcgaccagtattgcggcacttagcctgaaacagttttttacagatgcg
acgcttcaaaacttgctggacactgctttaatcagaaattacgacctgcaaattgctttg
aaaaatatggaagctgccgatgtgttgtttaaacagtcgaaattgggaaaccttccggaa
ctgaacctcaacattacggcaaattcaaaccgcccttcagataacagtctcaatggattg
agtgcaggtcagtttttaaaaacgaaacacgttgaagactacaatgcaaacctggcactt
agctgggaagcagatatatggggcaaaatcagaagccagaaacaggctgcattggccacc
tatctgcaaactgcagaagctaaaaaagcagtgcagacacgcttaatctcaaatgtggct
cagggatattaccgcctcctgatgatggatgagcaaatggccgttgccaaaagaaacctg
gctttaagtgacagtaccctgaggatcattcacatgcagtttgatgccggacaggtaact
tccttagccattcagcaggcggaagcacaacaactggttgctgcccagctgatccctgaa
ctggaacaaaacatcagcatccaggaaaatgccctgagcattctggcaggtcagcttccg
ggagcactggccagaaccgccagcttaaataaaatcagttttccggaacaactttcagcc
ggtttcccctcagcaatggtcagcagaagaccagatgtgaaaagtgcagaattgtctttg
aacatttccaatgcccaggtagggatcgcgaaagccggtttgtatccttcactgagcatc
acggccagtggaggtctgaacgctttcaaagcaagcaactggttcaacatcccggcttcc
ttgtttggaacggtagcaggggggatcacccaaccgatttttcagcgcagacaattgaga
acacaatatgaaaccgcaaagattaaccgtgaaaaaaccgtaattcaattcagacaatcg
gtattaaatgcggtaggtgaagtttctgatgaacttgttaaaattgagaagcttaaacaa
caatactccattgcacaaaatagggtgagcaccttacagcaggcggtaaaaaatgccaac
ctattgtttaaaaacggaatggccaattacctggaagtaatcacggctcaaagcaattct
ctgcaaagtgaattggaactggctacgataaaaacagcccaactcaacgcttcagtagag
ctttatcgcgctctggggggtggcttttag
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