Pseudomonas sp. VLB120: PVLB_11475
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Entry
PVLB_11475 CDS
T02897
Name
(GenBank) RND efflux system outer membrane lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv01501
beta-Lactam resistance
psv02024
Quorum sensing
Module
psv_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PVLB_11475
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PVLB_11475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psv02000
]
PVLB_11475
01504 Antimicrobial resistance genes [BR:
psv01504
]
PVLB_11475
Transporters [BR:
psv02000
]
Other transporters
Pores ion channels [TC:
1
]
PVLB_11475
Antimicrobial resistance genes [BR:
psv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PVLB_11475
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PVLB_11475
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PVLB_11475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Secretin_N_2
CtIP_N
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
AGZ35085
UniProt:
A0AAN0R276
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All DBs
Position
2524706..2526193
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AA seq
495 aa
AA seq
DB search
MNFAQTPLHRALQLLTRGRGSRLVGAGLCVALLSACTLSPDYHRPQMSTPVQFKQAEGWT
QAKPSDAIDRGAWWEIYGDAGLNALVEELNRSNQTVAQSEAQYRQAQALVRSSRASLFPS
LDLTTSKNRSAQGTGSSSSSLSNNSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAE
ASLADLAAIRLSQQSELVQNYLQLRVIDEQKRLLEATVAAYQRSLRMTENQYRAGVAGPD
AVAQARTQLKSTQADLIDLVWQRAQFENAIAVLMGKAPAEFSLADNQSIPALPDIPVTLP
SQLLERRPDIASAERNVMAANANIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWS
VGPSLAMTLFDAGKRSAEVDRTVAVYDQTVAQYRQTVLDSFKEVENYLVQLKVYADEAVV
RQEALDAARESLRLTENQYRAGLIGYLDVVNVQTTALSNERSVLNVLQGRLVASVQLIAA
LGGGWQSDEAFARQE
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgcccagacacctcttcaccgtgccctgcagttactgacacgtgggcgtggc
tcgcgcctggtcggcgcggggctgtgcgtggcgctgctgagtgcctgtaccctgagcccc
gactaccatcgtccccagatgagcaccccggtccagttcaagcaggccgaaggttggacc
caggccaagccgtccgatgccattgaccgtggggcgtggtgggagatctacggcgatgcc
gggctcaacgcgctggtcgaggagctcaatcgcagcaatcagaccgtcgcccagtccgaa
gcccagtatcgtcaggcccaggcgctggtgcgcagcagccgtgcctcgctgttccccagc
ctggacctgaccaccagcaagaaccgctcggcccagggcaccggtagcagcagttcgagc
ttgtccaacaacagcagcggcatccgcaacacctacaacgcgcagctgggggtgagctgg
gagatcgacctgtggggcaagttgcgtgaaacgctcaatgccaatgaggcgagcgctgaa
gccagtcttgccgatctggcggccattcgcctgagccagcagtcggagctggtgcagaac
tacctgcaactgcgggtcatcgacgagcagaagcgcttgctggaggccacggtggccgcc
taccagcggtcgctgcggatgaccgaaaaccagtaccgagcgggcgtcgccgggcccgat
gcggtggcccaggcccggacccagctcaagagcacccaggccgacctgatcgacctggtg
tggcagcgcgcccagttcgagaacgccattgcggtgctgatgggcaaggccccggccgaa
ttcagcctggctgataaccagtcgataccggcgttgccggacattccggtaacattgccg
tcgcaattgctcgaacgtcgtcccgacatcgcgtcggccgagcgcaatgtaatggctgcc
aacgccaacatcggcgtgtctcgcgcggcatacttccccgacttgtccctgagcatgagc
ggcggttattccagcagcagtttcagcaactggatcgagctgcccaaccgttactggtcg
gtggggccatcgctggccatgaccctgttcgatgctggcaaacgtagcgccgaggtggat
cgcaccgtggcggtgtatgaccagacggtggcgcagtatcggcagacggtgctcgacagc
ttcaaggaagtcgagaactacctggtgcagctcaaggtctacgccgacgaagcggtggtg
cgtcaagaggcgctggatgccgcgcgtgagtcgttgcgactgaccgagaaccagtatcgt
gcaggcttgattggctatttggatgtggtgaacgtgcagaccacggcattgagcaacgag
cgcagcgtgctcaacgtgctgcaggggcggttggtcgcgagcgtccagctgattgccgcg
cttggcggtggctggcagtccgacgaggcgttcgcccggcaggagtga
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