Pseudomonas sp. VLB120: PVLB_16405
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Entry
PVLB_16405 CDS
T02897
Name
(GenBank) RND efflux system outer membrane lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
psv
Pseudomonas sp. VLB120
Pathway
psv01501
beta-Lactam resistance
psv02024
Quorum sensing
Module
psv_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
psv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PVLB_16405
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PVLB_16405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psv02000
]
PVLB_16405
01504 Antimicrobial resistance genes [BR:
psv01504
]
PVLB_16405
Transporters [BR:
psv02000
]
Other transporters
Pores ion channels [TC:
1
]
PVLB_16405
Antimicrobial resistance genes [BR:
psv01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PVLB_16405
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PVLB_16405
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PVLB_16405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5344
Motif
Other DBs
NCBI-ProteinID:
AGZ36064
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All DBs
Position
3587742..3589151
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AA seq
469 aa
AA seq
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MTLPSRISLLTLSLCLAACSTPPPPKSGIAPPDNWQGETGAAGLTLPQTKWWKAFASPEL
DRLVERARRNSYDLAAATARVRQAQARAVIAGAPLLPALNFGFEGSRQHLLRGDGSDQLD
VSSSERTSTSFGTTLSAAYEIDFWGGLRAARDSGLHGLDASRFDRQTVELTLVSAVADSY
LQGLALDEQLRIARLNLRNARDVLGLVEVRQRSGSATRLELAQQRSLVAAQERQLPLLEQ
RQQDNRVTLATLLGDPVQHLPGSDERIDTVQWPAIGSGMPSDLLTRRPDIAAAEARLAAA
SANVQVARAALLPKLTLGAEFGSGARTLPQVFDSPYYTLTSGLVAPIFNNGRLRASRELA
EAEQEELLEAYRSSILAGFADVEKALNAIHGVDRQRQWQDEQVQQARLAFDLAQQRYGAG
AETLLTVLETQRTLYEAQDQQAQLRLARLQASVALYKALGGGWHVKTAQ
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacattgccaagccgcatcagcctgctgaccctgagcctttgcctcgccgcctgcagc
acaccgccaccgcccaaaagcggcatcgcaccaccggataactggcaaggagagaccggt
gctgccgggctcaccctgccacagacgaagtggtggaaagccttcgccagccccgaactg
gaccgtctggttgaacgtgcgcggcgcaacagctacgacctggcggctgccaccgcacgt
gtacgccaggcccaggcccgcgccgtgatcgccggcgcgccactgctgccggcgttgaac
ttcgggtttgaaggcagccgacagcacctgctgcggggcgacggcagcgaccagctcgat
gtcagcagcagcgaacgcaccagcacctcgtttggcaccacgctcagcgcggcctacgag
atcgacttctggggcggcctgcgcgccgcacgcgacagcggcctgcatggcctggacgcc
agccgcttcgaccgccagactgtggaactgaccctggtcagtgccgttgccgatagctac
ctgcaagggctggcactggatgagcaactgcgcatcgcccgcctgaacctgcgcaatgcg
cgggatgtgctgggcctggtcgaggtgcggcagcgctctggctcggccacgcgccttgag
ttggcgcaacaacgtagcctggtggccgcccaggagcgccaactgccgctgcttgagcaa
cgccagcaggacaaccgcgtcacgctggccaccctgctcggcgaccccgtgcaacatttg
cccggcagcgacgagcgcatcgacacggtgcagtggccggcaattggcagcggtatgccc
agcgacctgctgacccgccggccagacatcgcagccgccgaagcgcgcctggcggccgcc
agcgccaatgtgcaggtcgcacgggccgccctgctaccaaagctgaccctcggcgccgag
ttcggttcgggggcccgcaccctgccccaggtcttcgacagcccgtactacacgctgacc
tccggcctggtcgcgccgatcttcaacaacggccgactgcgggcctcgcgtgaattggcc
gaggcagagcaagaggagttgctcgaggcctatcgcagcagcatcctggccggcttcgcc
gacgtcgagaaagcgctcaacgccatccatggcgtcgaccggcaacggcaatggcaggat
gagcaagtgcaacaggcccgcctggccttcgacctcgcccagcaacgttacggtgccgga
gccgaaacgctgctgacggtgttggaaacccagcgcacgctgtacgaggcacaggatcag
caggcgcagttgcgcttggcgcgattgcaagcgagcgtggccctgtacaaggcactgggt
ggcggctggcacgtgaaaacagcccagtga
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