Pseudoliparis swirei (Mariana hadal snailfish): 130212778
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Entry
130212778 CDS
T09868
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04622
RIG-I-like receptor signaling pathway
pswi04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130212778 (adar)
04623 Cytosolic DNA-sensing pathway
130212778 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130212778 (adar)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
130212778 (adar)
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130212778 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
Period_C
Motif
Other DBs
NCBI-GeneID:
130212778
NCBI-ProteinID:
XP_056299950
LinkDB
All DBs
Position
22:13240764..13256163
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AA seq
1386 aa
AA seq
DB search
MSRGRGGPLKESDNRHPPPDSQANENYFGPGPSSLYPRAGPQQSPYSSYHHSPARPVVPI
QPPPAPSLSPSAPPIPKHRTVDPTSEAPNSSYNQNHGPNPAPNSFQYQQAEFLRGHSSEA
PQFRASPRGGGGGGVSDRCPSSSSQHQSGSSKYSSYPNNSSRGRREYSQDQTSVYPVSPR
SKTGPRPLNQNQFYGTNHNPYAIRQCRVPIDSVCEHFQTLSLHRDGRNRGGERFDRRSAS
RSSAHSLSTKVDLTLNSDIQDQVQRTLAALKPSQGISAKLLAKKLHLSKKIVNQALYLLA
RSKKASKQGLLPPEWSLCREPLRGEEDQNSKVQSPPSHLCVGSGHPPEPEAKVERKTETV
ENGAQSKEEDSNTESSSSYCISSDSSDSEESQSPAKGQHQEKQHPVTTSSPDPARPTMPE
QKELVMQYLLDTREATALVIAKNLGLKSSKQVNPTLYSLEKQGEVVKNNGSNPPTWDLSN
HRRERMERSLKASKSSRAEGDQIPEPSRDQNRGESVFLSSLSLPPILGLELLPLPEGWMP
EQSRSEVSQSSFQPPSIASNKDEETNEGQWATDDIPEFLNAIRRETDAGKLSVEQANSVG
TVAVSLAAPPPQNLWAKLQEVRLKNPVSGLMEYAQYLGHDCEFLLLDQSGPSHDPRFRMQ
VMLNRRLFPVAEASSKKVAKKDAAAATLRILIGEIQSGPSTGDEGTAVSADQVMDVLPDT
SGQAEGAAGAAGALGTSSEEGMGTVEGPCQPLSRSLPGGKNPVSVLMEYSQRSGNPIEFV
VTGQAGPPHDPRFMYRVKVGESLFTEASAPSKKAARQLAAEEAVKELMADGKLQLNKPQL
PLGSSSDSDATATTCPSLPPLTADELRAAHEAGVGDLINHLNNNAVSGLLEYARARGFAA
EIRLVGQSGPPHEPKFTYQAKLGGRWFPPVCASNKKQGKQEAADAALRVLIGEAERAART
GELIPAELPVSGSTLHDQIAMLSHQRFNALTTRIQHSLLGRKILATVVMRRGEGLGTVVS
LGTGNRCVKGEELSLKGDTVNDCHAEIISRRGFVRFLYIELLKHYDNTEDSIFEAVENDK
LQIKSDITFHLYISTAPCGDGALFDKSCSQAGDEDEGHHPLFENAKQGKLRTKVENGEGT
IPVESSAIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLTHFLHPIYLKSITLGYL
YSHGHLTRAVCCRLSRDGEAFTQSLPQPFRLNHPEVGRVSVYDSTRHTGKTKESSVNWSF
PDQQSVEVLDGTKGKLDGYGNKLCVSRVSKSNLFCLFRSVCERSGRTDLLTLPCYSQAKL
LAMSFQLTKQHFFRALSNHGYGAWIGKPMEEKSFESGEGNRNNGGVPVGYGSSRNGAAAE
VKQEDA
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtagaggagggcctctcaaagaatccgacaacaggcatccaccacccgac
tcccaggccaacgagaattactttggaccgggtccatcctcactctaccctagagctggc
ccacagcagagcccatattcaagttaccaccacagccctgcccgtcccgtagtgcccatc
cagccacccccagctccttctctcagcccctctgctccacccataccaaagcacaggaca
gtggatcctacatcagaggctccgaacagctcatataatcagaatcacggccccaatcct
gctcccaattcctttcagtaccaacaggcagagttcctcagaggacacagctctgaggcg
ccgcagtttagagccagtccacgtggagggggaggaggaggggtctcagacaggtgtcct
agttcctcatctcagcaccagtcaggctccagtaaatattcatcataccccaacaacagc
tcaaggggtagacgggagtatagtcaggaccagacttcggtatacccagtatccccgcgt
agcaaaacaggccctcgacccctgaatcaaaaccagttttacggtacaaaccacaaccca
tacgccatcagacagtgtcgcgtcccaatagattctgtgtgtgaacattttcagactttg
tcccttcatcgagacgggcgaaacagaggaggagaaaggtttgacagacgttctgcctcc
aggagttcggcacattcactctctactaaagttgacctaactcttaattctgacatccag
gaccaggttcagaggactttggctgctttgaagccaagtcagggtatctctgcaaaattg
ttagccaaaaaactgcatctttccaaaaagatagtcaaccaggctctttacttgttggcg
cgctcaaagaaagcctccaagcaaggactcctccctcctgagtggagtctttgcagagaa
cctctcagaggtgaagaagatcaaaactctaaagtacaaagtccaccttcccatctgtgt
gtcggctcaggacaccctccagaacctgaagccaaggttgaacgaaaaacagaaacagtt
gaaaacggggcacaaagcaaagaagaggactccaacacagaatccagttcttcttactgc
atctcttcagattcatctgactctgaagagtcccagtcaccagcgaaaggtcagcaccag
gagaaacaacatcccgtcactacaagctcacctgatccggctcgtcccacaatgccagaa
cagaaggagctagttatgcagtacctgctggatacaagggaggcaactgctcttgtcata
gccaaaaatctgggtcttaagagttccaagcaggtcaatccaaccctctactcgctggag
aagcaaggtgaagttgttaagaataatggctctaacccgcccacctgggatctctccaac
caccgcagagagaggatggaaaggagcctcaaagcctcaaagagcagccgtgctgagggg
gatcagatcccagaacccagtagagatcagaatagaggagagtccgtcttcctgtcgtcg
ttatcattaccaccaatactaggcctcgagctgctgccactcccagaaggttggatgcca
gagcaaagtcgtagtgaggtgtcccagtcctcattccagcccccctctatcgcctcgaat
aaagatgaagaaaccaacgaaggacagtgggcgactgatgacatcccagaattcctcaac
gccattcgcagagagacagatgctgggaaactgtctgtcgaacaggccaactctgtggga
actgtagctgtatcgctggctgctccacctccccagaacctgtgggccaaattgcaggag
gtgaggctgaagaaccccgtcagtggtctcatggagtatgcccagtatctgggccatgac
tgtgagttcctgctcctcgaccaatcggggccctctcacgacccacgatttcgtatgcag
gtgatgctcaacagaaggctgtttcctgtcgcagaagcttccagtaagaaagttgcaaaa
aaggatgccgcggcggccaccctgcgcattctcatcggagagattcagtcagggccgagt
acgggagacgagggaaccgccgtcagtgcggaccaagtgatggatgtactcccagacacc
agtgggcaagctgaaggcgcagcaggcgcagcaggggctttagggacgagttctgaggaa
ggaatgggtacagtggaaggaccttgccagccgctgtcccgctccctgcctggtgggaag
aatccggtgtctgtcctgatggagtacagccagcgcagcgggaaccccatcgagttcgtc
gtcactgggcaggcaggcccaccgcatgatccaaggttcatgtacagggtgaaggttgga
gagagcttgtttacagaggcctcagctcccagcaagaaggcagcccgccagctggcagca
gaggaggccgtaaaggaattaatggctgatgggaaactgcagctcaacaagcctcagttg
cccctgggctcttccagtgacagtgatgctactgcgacgacgtgtccctctttgccacct
ctcactgcagatgagttgcgagcagcacacgaggcaggagtgggagatctaatcaaccac
ttgaacaacaacgccgtgtcaggtcttctggaatatgctcgagcgcgaggctttgccgct
gagattcgactcgtgggccagtctggaccaccgcatgagccgaagttcacctaccaggcc
aagctgggcggacgctggttccctccagtgtgtgcgtccaacaagaagcagggaaaacag
gaagcagccgatgcagctctacgggttctgattggagaggctgagagagcagcccgcact
ggggagcttatcccagctgagcttccagtgagtggcagcactttgcatgaccagatagcg
atgttgagtcaccagcgtttcaacgccctgaccacacgtatccagcacagccttctggga
cgcaagattctggccaccgtcgtcatgaggaggggagaaggcctgggcactgttgtcagc
ctgggaactggaaatcgatgtgttaaaggggaggagctaagccttaaaggggacactgtt
aatgattgccacgcggaaatcatctccagaaggggatttgttcggtttctgtacattgag
ctgctcaagcattacgataacacagaggacagtatattcgaggcagtggagaatgacaaa
ctgcaaatcaaatctgatatcacctttcacctttacatcagcacggcaccttgtggggat
ggcgctctgtttgacaagtcatgcagtcaggcaggagatgaagacgagggtcatcatcca
ctgtttgagaatgctaagcagggaaagctgcgcaccaaagtggagaacggcgagggcacc
atcccagtggagtcgagtgccattgtgcccacgtgggacggcatccagcacggggagagg
ctgcgaaccatgagttgcagcgataagatcctccgctggaacgtgctgggtctgcaggga
gccctgctcacccatttcctgcatccaatctacctgaagtcaatcacgctcggctacctg
tacagccacggtcacctcactcgggccgtttgctgtcggctgtccagagacggtgaagcg
ttcacccaaagtctccctcagcccttcaggctaaatcacccagaggttggcagggtgagt
gtgtacgactccacacgacacacaggcaagaccaaggagtcgagtgtgaactggagcttt
ccagaccagcaaagcgtcgaggtgctggatggcaccaagggcaaactggatggatatggg
aacaaactctgtgtgtccagagtgtccaagtccaacctgttctgcctgttccgctctgtg
tgtgagcggagtggccgcaccgacctcctcacgctgccctgctactcgcaggccaagctg
ttggccatgtccttccagctaaccaagcagcatttcttccgagctctgagcaaccacggc
tacggcgcctggatcggcaagccgatggaagagaagagcttcgagtcaggggagggaaac
cggaacaatggaggggtccctgtgggatacggcagcagtagaaatggagcagcagcggag
gtcaagcaagaggacgcatag
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integrated database retrieval system
