Pseudomonas sp. W03: SD196_12135
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Entry
SD196_12135 CDS
T11012
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pswo Pseudomonas sp. W03
Pathway
pswo01501
beta-Lactam resistance
pswo02024
Quorum sensing
Module
pswo_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD196_12135
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SD196_12135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswo02000
]
SD196_12135
01504 Antimicrobial resistance genes [BR:
pswo01504
]
SD196_12135
Transporters [BR:
pswo02000
]
Other transporters
Pores ion channels [TC:
1
]
SD196_12135
Antimicrobial resistance genes [BR:
pswo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SD196_12135
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
SD196_12135
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
SD196_12135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
XOT24906
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All DBs
Position
2580638..2582023
Genome browser
AA seq
461 aa
AA seq
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MTGCSTPVAKPSVELPSRFAAATASEMEPEAAWWKAFDDPVLTDLVQRAMRENRDVRIAA
ERLGAARAGETISRSWLFPSVGVSAGGADRRSGYDSATRQLYPDTKTASVGLDVSWELDL
SGRLRAGAAAAKADALAAEYGERGVRLLVMSDIASNYFTLRGALRQAETLRAIAAAQDET
LRLVTARKRVGLATDFDVERAQTEAASARAQIPPMETLAAVARHRIAVLIGDQAFNAATI
VPSANEALVPQPQSGQPAALLQRRPDVLALMAQLDAANARRQQAAAEWFPRLFLGASFGS
QDLALNGVSLGTARFTNVAGLLAMPLFNAGRTRAINEVAESGQREALLRTEDGIARALED
VENALVTLGQERQRAASLQVASATAEAALGHAQSLYTRGQVDLLPLLDAQRARLAARLNA
NDSSTRLLLDSVQLYKALGGGWQVFEPAAPTARAGSAQPLS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacgggttgttccacgccggtggccaagccgtcggtggagcttccttcccgattcgct
gccgccacggcttccgagatggaacccgaggctgcatggtggaaagccttcgacgatccg
gtgctgaccgatctggtgcagcgcgcgatgcgcgagaaccgtgatgtcaggatcgccgcc
gagcgtctgggcgccgcgcgggccggcgagacgatcagccgttcctggctgttccccagc
gtgggtgtgtccgctggcggcgccgaccgtcgcagcggatacgactcggccacccggcag
ctgtatccggataccaaaaccgccagcgtcggactggacgtctcctgggagctcgacctg
agcggtcgtctgcgcgctggcgcggcggccgccaaggccgatgcgctggcggccgaatac
ggcgagcgcggtgtacgcctgctggtgatgagcgacatcgccagcaattacttcaccctg
cgtggcgcgctgcgccaggccgagacgctgcgcgccattgcggcagcgcaggacgaaacg
ctgcgcctggtcaccgcgcgcaagcgcgtgggcctggcgaccgacttcgacgtcgagcgc
gcgcagaccgaagcggcctccgcccgcgcgcagattccgccgatggaaaccctggcggcc
gtggcgcgccatcgtatcgcggtgctgatcggcgaccaggccttcaatgccgccaccatc
gtgccttcggccaatgaggcgctagtgccccagccgcagtctgggcaaccggccgcgctc
ctgcagcgccgtcccgatgtcctggcgctgatggcgcaactggatgcagccaatgctcgc
cgtcagcaagccgccgccgagtggttcccgcgcctattcctcggcgcatccttcggcagc
caggacctggcgctgaacggcgtcagcctcggcactgcccgtttcaccaacgtggcggga
ttgctcgcgatgccgttgttcaatgccggtcgcacgcgcgccatcaacgaggtcgccgag
agcggccagcgcgaagcgctgctgcgcaccgaagacggcatcgcccgggcgctcgaagac
gtggaaaacgcgctcgtcaccctgggacaggaacgccagcgtgcggcctcgctgcaggtt
gcatcggccactgccgaggccgcgctcggccacgcccagtcgctctatacccgcgggcag
gtcgacctgctgccgctgctggacgcgcagcgcgcacgcctggccgcacggctgaacgcc
aacgacagcagcacgcgcctgctgctcgacagcgtccagctctacaaggcgctgggcggc
ggctggcaagtcttcgagccagcggccccgactgcaagggccggcagcgcccaaccgctt
tcctga
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