Pseudomonas sp. W03: SD196_25395
Help
Entry
SD196_25395 CDS
T11012
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pswo Pseudomonas sp. W03
Pathway
pswo01501
beta-Lactam resistance
pswo02024
Quorum sensing
Module
pswo_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pswo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SD196_25395
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SD196_25395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswo02000
]
SD196_25395
01504 Antimicrobial resistance genes [BR:
pswo01504
]
SD196_25395
Transporters [BR:
pswo02000
]
Other transporters
Pores ion channels [TC:
1
]
SD196_25395
Antimicrobial resistance genes [BR:
pswo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SD196_25395
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
SD196_25395
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
SD196_25395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
XOT22213
LinkDB
All DBs
Position
5558062..5559543
Genome browser
AA seq
493 aa
AA seq
DB search
MTPLRIARLPACMLGAALSLAGCVSSSGLLPSGQATDPASLKAGTTLNGTTLSPASWPSQ
RWWTSLGDPQLDHLIDEALRGTPDLDIASARARQAIAAAQAQDADRLPSVKGTASYAGIR
APESVLPAPMGGRYSAVKYLSLSFSYDLDLWGGKRAAWEAALGQANAAEVDRQAASITLS
TNVARAYSNLAHAFVVRDLARDELERSQHLYQLSQKRMDAGLDSKVQLQQTQTQVASAKQ
QLAAAEQEIASDRIALAVLLGQGPDRGQSLQRPQVLKPGALALPSNLPAELLGRRPDIVA
ARWRVEASAKDIQSAKTEFYPNLNLGAMVGLAAMHTEDVLKAPSRFFQIAPAISLPIFDG
GRLRANLAGKDADYDLAVAQYNKTLVNALGEVTDDLGRLRSLEQQINDQREARDIAKSNF
DLAMRRYGEGVGNYLDALSVQQQLLVAERQLANLDAERIDLSVQLVQALGGGYQPDTTST
PAPLAQANAAAAH
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccttgcgcatcgcccgcctaccggcctgcatgctgggcgcggcgctgagcctt
gcgggctgcgtcagctcctcgggcttgctgcccagcggccaggccaccgaccccgccagc
ctgaaagccggtactaccctcaatggcacaaccctgtcccccgcctcctggcccagccag
cgctggtggaccagcttgggcgatccgcaactggaccacctgatcgacgaagccctgcgc
ggtacgccggacctggacatcgccagcgcccgcgcgcgccaggccatcgccgccgcccag
gcgcaggacgccgaccgcctgcccagcgtgaagggcaccgccagctacgccggcatccgc
gcccccgaaagcgtgcttcccgccccgatgggggggcgttattcggcagtgaagtacctg
tcgctgagcttcagctatgacctggacctctggggcggtaagcgcgccgcctgggaagcg
gccctgggccaggccaacgccgccgaagtcgaccgccaggccgcgtcgatcaccctttcc
accaacgtcgcccgcgcctacagcaacctggcccatgcctttgtcgtccgcgacctggcc
cgtgacgagttggagcgctcgcagcacctctaccagctcagccagaaacgcatggacgct
ggcctggatagcaaggtccagctgcagcagacgcagacccaggtcgccagcgcgaagcaa
caactggcggctgcggaacaggaaatcgccagcgatcgcatcgccctggccgtgctgctg
ggccagggcccggaccgcgggcagagcctgcagcgcccgcaggtactaaagcctggcgct
ctggcactgccctcgaacctgcctgccgaactgctcgggcgccgcccggacatcgtcgca
gcacgctggcgcgtcgaggcgagcgccaaggacatccagtcggccaagaccgagttctat
ccgaacctcaacctgggggcgatggtcggcctggccgcgatgcacaccgaggacgtactg
aaggcgccgagccgcttcttccagatcgccccggcgatttccctgccgatcttcgacggc
ggccgcctgcgcgcaaacctcgccgggaaagacgccgactacgacctggccgtcgcccag
tacaacaagaccctggtcaacgccctcggcgaagtcaccgacgacctcggccggctgcgc
tcgctggagcagcagatcaacgaccagcgcgaagcacgggatatcgccaagtccaacttc
gacctggccatgcgccgctacggcgaaggggtcggcaactacctcgacgccctcagcgtg
cagcagcagctgctggtcgccgagcgccaactggccaacctcgacgccgagcgcatcgac
ctctcggtccagctcgtccaggccctgggcggcggctaccagcccgataccacctccact
cccgccccgctcgcccaggcgaatgcggccgccgcgcattga
DBGET
integrated database retrieval system
