Psychroserpens sp. NJDZ02: E9099_14250
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Entry
E9099_14250 CDS
T05945
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
psyn
Psychroserpens sp. NJDZ02
Pathway
psyn01501
beta-Lactam resistance
psyn01503
Cationic antimicrobial peptide (CAMP) resistance
psyn02020
Two-component system
psyn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psyn00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
E9099_14250
09132 Signal transduction
02020 Two-component system
E9099_14250
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E9099_14250
01503 Cationic antimicrobial peptide (CAMP) resistance
E9099_14250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyn02000
]
E9099_14250
02044 Secretion system [BR:
psyn02044
]
E9099_14250
01504 Antimicrobial resistance genes [BR:
psyn01504
]
E9099_14250
Transporters [BR:
psyn02000
]
Other transporters
Pores ion channels [TC:
1
]
E9099_14250
Secretion system [BR:
psyn02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
E9099_14250
RTX toxin transporter
E9099_14250
Multiple protein transporter
E9099_14250
RaxAB-RaxC type I secretion system protein
E9099_14250
Antimicrobial resistance genes [BR:
psyn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
E9099_14250
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
E9099_14250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
QCE42515
LinkDB
All DBs
Position
3234907..3236214
Genome browser
AA seq
435 aa
AA seq
DB search
MKKHIYIAALLFVFSISVKAQDLVPIAKSDVLSKVSERNTSIKISEEDFKQARADYRQTN
AVFLPNITASHTAMATTNPLMAFGSKLNQEILTQNDFNPALLNDPSQIENYATKFEIQQP
LINLDGIYQRKAAKSKMEAMSLKTERTQDYLAFEVDKAYMQLQLAYKAVSVLEKALDAAN
ANKKLADDSFKQGYLQRADVLNVEVRVTEVQNQLQTAKSNVQNASNYLSFLMNDDTYVVY
MPSDDLTIGTFTMEDKAVSENRSDIKAMQLASNAYEAMNKADKMAFLPRLNAFGSYELYD
DNIFQGGSNGYLFGAQLSWDIFQGSKRIGKAQKSKSEFEKSKLEYKQYVSKSNLELNKAK
RAFIDADNKLKLTTLALQQSEESLRIRTNRFKEGLEKTSDLLLAETQYAQKQLEYYQTIF
EYNYTQAYLQFLTKE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacacatatatatagccgcgttactttttgttttcagtatatctgttaaagca
caagatttggtgcccatagcaaaatctgatgttttgtctaaagtatcagaacgtaacact
agtataaaaatttctgaagaggactttaaacaagccagagcagattatagacaaaccaat
gcggtgtttttaccaaacattacagcaagtcacactgcaatggcgacaactaatccattg
atggcttttggttctaaattaaatcaggagattttaacgcaaaacgattttaatccggca
ttgctaaacgatccctctcagattgaaaactatgccaccaagttcgaaattcagcaacca
ttaataaatttagatggtatttaccaacgtaaagcagctaaatctaaaatggaagcgatg
tctttaaagacagaacgcacacaggattatttagcttttgaagtagataaagcctacatg
cagttacaattagcttacaaagcagtaagtgttttagagaaagctttggacgcagcaaat
gctaataagaagctagctgacgatagctttaaacaagggtatttgcaacgtgcagatgtg
ttgaatgttgaagtccgtgtcactgaggttcaaaaccagttacaaaccgctaaaagtaat
gtgcaaaatgcgtctaattatttgtcttttttaatgaatgatgatacttatgttgtgtac
atgcctagtgacgatttaaccattggcacatttacaatggaagacaaagcagtgtctgaa
aacagatcggatattaaagccatgcaattggcctcaaacgcttatgaagcgatgaataaa
gctgataaaatggcgtttttaccacgtttaaatgcgtttgggagttatgagctgtatgac
gataacatttttcaaggcggttctaatggatacttattcggagcacaattaagttgggat
atatttcaaggctctaaacgtattggaaaagcgcaaaaaagtaaatcggaattcgaaaaa
tctaaattagaatacaagcaatatgtgtctaaaagtaatttagaattaaataaagcgaaa
cgcgcctttatagatgctgacaataagttaaaattaacaactttagcattacaacaatct
gaagaatctttaagaattagaaccaacagatttaaagaaggtttagaaaaaacgtctgat
ttattactagccgaaacgcaatatgcacaaaaacaattggagtactaccaaaccattttt
gaatacaattacacacaagcatacttacaatttttaactaaagaataa
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