Pseudomonas syringae CC1557: N018_23380
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Entry
N018_23380 CDS
T03014
Name
(GenBank) channel protein TolC
KO
K12340
outer membrane protein
Organism
psyr
Pseudomonas syringae CC1557
Pathway
psyr01501
beta-Lactam resistance
psyr01503
Cationic antimicrobial peptide (CAMP) resistance
psyr02020
Two-component system
psyr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psyr00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
N018_23380
09132 Signal transduction
02020 Two-component system
N018_23380
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N018_23380
01503 Cationic antimicrobial peptide (CAMP) resistance
N018_23380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psyr02000
]
N018_23380
02044 Secretion system [BR:
psyr02044
]
N018_23380
01504 Antimicrobial resistance genes [BR:
psyr01504
]
N018_23380
Transporters [BR:
psyr02000
]
Other transporters
Pores ion channels [TC:
1
]
N018_23380
Secretion system [BR:
psyr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
N018_23380
RTX toxin transporter
N018_23380
Multiple protein transporter
N018_23380
RaxAB-RaxC type I secretion system protein
N018_23380
Antimicrobial resistance genes [BR:
psyr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
N018_23380
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
N018_23380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AHG43007
UniProt:
W0MX54
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All DBs
Position
5186911..5188350
Genome browser
AA seq
479 aa
AA seq
DB search
MLRKLSLVVAVSFASSGLTWAADLPMPTKTGLLNVYQQAVDNNADLAASRADYDARKEVV
PQARAGLLPNISGSVQNSNTRTSIDQPRAVATRSGNVYQATLSQPIFRADRWFQLQAAEA
SNEQAALELSATEQNLILQSAQSYFSVLRAQDNLASTKAEEAAFKRQLDQANERFDVGLS
DKTDVLQAQASYDTSRASRLLAKRQVEDAFQALVTLTNREYNSIEGIVHTLPVLAPTPND
AKAWVDTAAQQNLNLLASNYAVSAAEETLRQRKAGHAPTLDAVATYQRGDNDALGFSNPN
YTGRNYGGDVEQRSIGVQLNIPIYSGGLTSSQVREAYSRLSQSEQRRESLRRQVVENTRN
LHRAVNTDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYASVRDYNNT
RYDYILDNLRLKQAAGTLNPGDLQDLSRYLKPDYNPDKDFLPPDLATATQKNFERPAQR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcaaactttcgttggttgtggccgtttcgtttgcgtccagcgggctgacctgg
gcagccgacctgccaatgccgaccaagaccggcctgctgaatgtgtatcagcaggcggtg
gacaacaacgccgacctcgccgcttcgcgcgctgattacgatgcccgcaaagaagtcgtg
ccgcaggcgcgtgccggtctgctgccgaatatttccggtagcgtgcagaacagcaacacc
cgcaccagcatcgaccagccacgagccgttgccacccgcagcggcaatgtctatcaagcc
acactgagccagccgatcttccgcgccgaccgctggttccagttgcaggcagcagaagcg
agcaacgaacaggcagcactggagctgtccgccaccgaacagaacctgatcctgcaatcg
gcgcagagctatttcagcgtgttgcgtgcgcaggacaacctggcgtcgaccaaggctgag
gaagcagcattcaaacgccagctggatcaggccaatgagcgcttcgatgtcggcctgtcg
gacaagaccgatgtgctgcaagctcaggccagttatgacacatcgcgcgccagccggctg
ctcgccaagcgtcaggtggaggatgcctttcaggcgttggtaaccctgaccaatcgtgaa
tacaactccatcgaaggcatcgtccacacgttaccggtgctcgcgcccacacccaatgac
gccaaggcctgggtcgacaccgccgcacagcagaacctcaatctgctggccagtaactac
gcggtcagcgccgccgaagaaaccctgcgccagcgcaaggccgggcacgcaccgacactg
gacgccgtggccacctaccagcgtggcgacaacgacgcactgggtttcagcaaccccaac
tacaccggccgcaattacggcggcgatgtcgagcagcgcagcattggtgtgcagttgaat
atcccgatctatagcggcggtttgaccagctcgcaggtgcgcgaggcttattcgcggttg
agccagagcgagcagcgtcgtgaaagcctgcgccgtcaggtggtggaaaacacccgcaac
ctgcaccgtgccgtgaacactgatgtggagcaggtccaggcgcgcaagcagtcgatcatc
tccaaccagagcgcgctggaagccacggaaatcggctatcaggtcggtacgcgcaacatc
gtcgacgtgctggatgcgcagcgccagctgtatgcctcggtgcgtgattacaacaacacg
cgctatgactatatcctcgacaacctgcgcctcaagcaggcagccggcaccctgaacccc
ggcgacctgcaggacctgtcgcgctacctgaagcctgactacaacccggacaaggacttc
ctgccgccggacctggcgactgcgacgcagaagaacttcgagcggcctgcgcaacgctga
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