KEGG   Pseudomonas syringae CC1557: N018_23380
Entry
N018_23380        CDS       T03014                                 
Name
(GenBank) channel protein TolC
  KO
K12340  outer membrane protein
Organism
psyr  Pseudomonas syringae CC1557
Pathway
psyr01501  beta-Lactam resistance
psyr01503  Cationic antimicrobial peptide (CAMP) resistance
psyr02020  Two-component system
psyr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psyr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    N018_23380
  09132 Signal transduction
   02020 Two-component system
    N018_23380
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    N018_23380
   01503 Cationic antimicrobial peptide (CAMP) resistance
    N018_23380
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:psyr02000]
    N018_23380
   02044 Secretion system [BR:psyr02044]
    N018_23380
   01504 Antimicrobial resistance genes [BR:psyr01504]
    N018_23380
Transporters [BR:psyr02000]
 Other transporters
  Pores ion channels [TC:1]
   N018_23380
Secretion system [BR:psyr02044]
 Type I secretion system
  alpha-Hemolysin/cyclolysin transporter
   N018_23380
  RTX toxin transporter
   N018_23380
  Multiple protein transporter
   N018_23380
  RaxAB-RaxC type I secretion system protein
   N018_23380
Antimicrobial resistance genes [BR:psyr01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump AcrEF-TolC [MD:M00696]
    N018_23380
   Multidrug resistance, efflux pump MdtEF-TolC [MD:M00697]
    N018_23380
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: AHG43007
UniProt: W0MX54
LinkDB
Position
5186911..5188350
AA seq 479 aa
MLRKLSLVVAVSFASSGLTWAADLPMPTKTGLLNVYQQAVDNNADLAASRADYDARKEVV
PQARAGLLPNISGSVQNSNTRTSIDQPRAVATRSGNVYQATLSQPIFRADRWFQLQAAEA
SNEQAALELSATEQNLILQSAQSYFSVLRAQDNLASTKAEEAAFKRQLDQANERFDVGLS
DKTDVLQAQASYDTSRASRLLAKRQVEDAFQALVTLTNREYNSIEGIVHTLPVLAPTPND
AKAWVDTAAQQNLNLLASNYAVSAAEETLRQRKAGHAPTLDAVATYQRGDNDALGFSNPN
YTGRNYGGDVEQRSIGVQLNIPIYSGGLTSSQVREAYSRLSQSEQRRESLRRQVVENTRN
LHRAVNTDVEQVQARKQSIISNQSALEATEIGYQVGTRNIVDVLDAQRQLYASVRDYNNT
RYDYILDNLRLKQAAGTLNPGDLQDLSRYLKPDYNPDKDFLPPDLATATQKNFERPAQR
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgttgcgcaaactttcgttggttgtggccgtttcgtttgcgtccagcgggctgacctgg
gcagccgacctgccaatgccgaccaagaccggcctgctgaatgtgtatcagcaggcggtg
gacaacaacgccgacctcgccgcttcgcgcgctgattacgatgcccgcaaagaagtcgtg
ccgcaggcgcgtgccggtctgctgccgaatatttccggtagcgtgcagaacagcaacacc
cgcaccagcatcgaccagccacgagccgttgccacccgcagcggcaatgtctatcaagcc
acactgagccagccgatcttccgcgccgaccgctggttccagttgcaggcagcagaagcg
agcaacgaacaggcagcactggagctgtccgccaccgaacagaacctgatcctgcaatcg
gcgcagagctatttcagcgtgttgcgtgcgcaggacaacctggcgtcgaccaaggctgag
gaagcagcattcaaacgccagctggatcaggccaatgagcgcttcgatgtcggcctgtcg
gacaagaccgatgtgctgcaagctcaggccagttatgacacatcgcgcgccagccggctg
ctcgccaagcgtcaggtggaggatgcctttcaggcgttggtaaccctgaccaatcgtgaa
tacaactccatcgaaggcatcgtccacacgttaccggtgctcgcgcccacacccaatgac
gccaaggcctgggtcgacaccgccgcacagcagaacctcaatctgctggccagtaactac
gcggtcagcgccgccgaagaaaccctgcgccagcgcaaggccgggcacgcaccgacactg
gacgccgtggccacctaccagcgtggcgacaacgacgcactgggtttcagcaaccccaac
tacaccggccgcaattacggcggcgatgtcgagcagcgcagcattggtgtgcagttgaat
atcccgatctatagcggcggtttgaccagctcgcaggtgcgcgaggcttattcgcggttg
agccagagcgagcagcgtcgtgaaagcctgcgccgtcaggtggtggaaaacacccgcaac
ctgcaccgtgccgtgaacactgatgtggagcaggtccaggcgcgcaagcagtcgatcatc
tccaaccagagcgcgctggaagccacggaaatcggctatcaggtcggtacgcgcaacatc
gtcgacgtgctggatgcgcagcgccagctgtatgcctcggtgcgtgattacaacaacacg
cgctatgactatatcctcgacaacctgcgcctcaagcaggcagccggcaccctgaacccc
ggcgacctgcaggacctgtcgcgctacctgaagcctgactacaacccggacaaggacttc
ctgccgccggacctggcgactgcgacgcagaagaacttcgagcggcctgcgcaacgctga

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