Puntigrus tetrazona (Sumatra barb): 122359966
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Entry
122359966 CDS
T08985
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase isoform X1
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04622
RIG-I-like receptor signaling pathway
ptet04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122359966 (adar)
04623 Cytosolic DNA-sensing pathway
122359966 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122359966 (adar)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
122359966 (adar)
Spliceosome [BR:
ptet03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122359966 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
Motif
Other DBs
NCBI-GeneID:
122359966
NCBI-ProteinID:
XP_043116149
LinkDB
All DBs
Position
16:15206171..15222270
Genome browser
AA seq
1384 aa
AA seq
DB search
MSRGRGGFYKDCQQFSHPPQQGKPQFHYHQNTGHPRGPRVPSPDSVSGSYPHPSFYSTRP
GAPGVPSRARPFPPSPSDPPLWASPQHGSEQIFNSNGLSFRQHQVQFLRGQSAQAPQFKA
PQQRASQTSSRGEEVSTGRIQYQAGYRDYKSSGSGFGRRDCYGRGRGNWQRDQNFGNKPG
PKRKSHWNHYLQKGQYYPSQYTKHYWNTQVDDVSSGLHDLRLGDQVTRVDTSDTSSCSSL
ASKVSSSLGSVRESLYLTPEIQQLVLDFLTSLRPGETVQARALGKKLCLPKKIVNKALYA
LLRTNQAVKQGESPPLWSLRKEEDREPIKERGQTQFSKESEKKPGQKSSINLESTGNLIN
TCASSASRVLVEADSESTDQSEDSESEDTFETLLPDRDQNTLLPAVQSVTLSTMADTKDS
KEKVLQYLYEAGTSNALVIAKNLGLRSAKQVNPTLYAMEKQGDVKRDSEVTPPTWSLSAH
RQEKMDRQRKAAATAKQDESSAQMINFAVEAITNINAGLEFSGDTTAKPMEILGNNTHDN
TELNKPGHEAMPPKPSELSSHTFHYFQPPPYYQDMASNGGERSQWASDDIPEFLNTIRSE
VAVSLAAPPPPAQSLESSRLQKLREARSKNPVSGLMEFAQHLGHTCEFLLLDQSGPSHDP
RFRMQVMLDGRRFPPADGPNKKVAKKDAAAITLKILLKEMEGAGDGGEEEELWIEAAESN
TDLADDMLGGTDTPPQALSRSLPGGKNPVSVLMEHSQRSGHAIQFIKTGQEGPPHDPRFM
FRVQVGERLFPEASAPSKKAAKQLAAEEAVKELMGDGLLHLNKPPGTFCPLGDNESQPAI
HACPSLPPLTAAELQAAHEAGVGDLINHLNNNAVSGLLEYARARGFAAEIRLVGQSGPSH
EPKFTYQAKLGGRWFPAVCASNKKQGKQEAADAALRVLIGEAEKAARTGELTPELPVSGS
TMHDQIAMLSHQRFNALTARIQHSLLGRKILATIVMRKGSDTLGTVVSLGTGNRCVKGEE
LSLRGDTVNDCHAEIISRRGFIRFLYGELMKHWESPGDETIFEVADDGKLKIKSDITFHL
YISTAPCGDGALFDKSCSEAAELNGSQHMPLFENVKQGKLRTKVENGEGTIPVESSDIVP
TWDGIQHGERLRTMSCSDKILRWNVLGLQGALLSHFIHPVYLRSITLGYLYSHGHLTRAV
CCRLARDGDAFKKSLPANFTLNHPEVGRVSVYDSTRHTSKTKESSVNWSQPDQFTVEVLD
GTKGKLDSPKMEISRVSKSNLFRLFHALCQRAGRADLLAQPSYAHAKMAATSFQDAKRLF
FLALNQHGYGAWIGKPLEEKSFEGEARSGVSGDARAPGPPGCAVDPNSCSGSNNNNVNSA
AQGF
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtagaggagggttttacaaagattgccagcaattctcccaccctccccaa
cagggaaaacctcagtttcattaccaccaaaacactggtcacccacggggccctcgtgtc
ccaagcccagactctgtatctggaagctatccgcacccttccttttactccactcgcccg
ggtgctcctggcgtgccttcacgagctcgtccttttccccctagcccctctgatccaccc
ctgtgggcatccccccagcacggcagtgaacagatcttcaactcaaatggtctaagcttc
cgacaacaccaggtgcagttcctcagggggcagagtgcacaggctccacagttcaaagca
ccccagcagcgagcgtcccaaacctccagccgaggagaagaggtctctactgggcgtatc
cagtaccaggcaggttatcgtgactacaaatcaagtggcagcggttttggaagaagagac
tgctacggcagaggcagaggaaactggcaaagggatcagaacttcggaaataaacctgga
cctaaaagaaagtctcactggaatcactatctccagaagggacagtattatcccagtcaa
tatactaagcactactggaatacacaggtagatgatgtgtcctcgggccttcatgatctg
cgtttgggtgaccaggtaacaagggtagacacctctgacacctcgtcctgcagtagcctt
gccagcaaggtttccagttctctcggctcggtcagagagtccctgtatttgacccctgag
atccagcaactggtcctcgattttttgacgtcactcaggccaggcgagactgttcaggcc
agggccttgggtaaaaaactctgccttcccaagaagattgttaataaggcattatatgcc
ctcttaaggacaaaccaagccgtaaaacaaggtgagagtcctcctctgtggagcctccgc
aaggaagaggaccgtgagcccatcaaagagagaggccaaactcagttttcaaaggaatct
gaaaaaaagcctggtcagaagtcatccataaacctagagtctacagggaatctcatcaac
acctgtgcttcctctgcatcacgggtccttgttgaggctgacagcgaatccactgaccag
tcagaggactctgaaagtgaagatacctttgaaacattgcttcctgaccgggatcaaaac
actcttttgcctgctgtgcagtcagtaaccttgtcaacaatggccgatactaaagatagc
aaagagaaggtcctacagtacctctatgaagcaggtacaagcaatgcgcttgtgattgcc
aagaaccttggcctgagaagtgccaagcaggttaatcccacgctctatgcaatggagaaa
caaggagacgtaaaacgtgactctgaagttacaccgcctacctggtcgcttagtgcacat
cggcaagaaaagatggaccgccaacgaaaagccgctgcaactgcaaaacaggatgaaagc
agtgcacagatgattaactttgctgtggaagcaattacaaacataaatgctggacttgag
ttttcaggtgataccacagcaaagccaatggagattttaggcaacaacacgcatgataac
acagagcttaacaagcctggccatgaagcaatgccacccaaacccagtgaactttcctcc
cacaccttccactacttccaacctcctccttactatcaggatatggccagtaatggagga
gaacgctcacagtgggcatctgacgatattccagagttcctgaacacgattcgctccgag
gttgctgtttcgttggctgctccccctcccccagctcaaagcctggagtcgagcagactg
cagaaactgagagaggcccgcagtaagaacccagttagtggactaatggagtttgctcag
catcttggacacacttgtgaattcctacttctggaccagtctggaccctcacatgatccc
aggtttcggatgcaggtcatgctagatggtcgtaggtttccaccggctgatggtccaaac
aaaaaagtggccaaaaaagatgctgcagccataacactaaagattcttttgaaggagatg
gaaggagctggtgatggtggtgaagaagaagaactgtggattgaggcagctgagtcaaac
actgatctggcagatgatatgctaggtggtacagatactccaccccaagctctttctcgg
tctttacctggaggaaagaacccggtatctgttctaatggagcatagccagcgcagtggg
catgccatccagtttatcaagacaggacaggaagggccaccccatgatccaaggtttatg
ttccgcgtgcaggtcggagagcgcctcttccctgaagcctcagcacccagtaagaaagca
gcgaagcagctggcagcggaggaggctgtgaaagagctgatgggagatggactactacat
ctcaacaagcctccaggtactttctgtccgctgggggacaacgagtctcagccagcgatt
cacgcgtgtccctcgctaccccctctgaccgcagctgagctccaggcagctcacgaagca
ggtgttggtgaccttatcaatcacctgaacaacaacgctgtctccggccttctcgagtac
gcccgtgctcgaggctttgctgctgagatccgcctggtgggccagtccggaccctcgcac
gagcccaagtttacataccaggctaaattgggagggcggtggtttcctgcagtttgtgct
agtaataaaaagcaggggaagcaggaggctgcggacgctgctcttcgagtgctcattgga
gaagcagagaaagcagcacgtactggagagctcacgccggagctgccagtgtcaggcagt
acgatgcatgatcagatcgccatgctgagccatcagcgctttaatgccctcacagcgcgc
atccagcacagccttctgggtaggaagattcttgctaccattgtgatgcgaaaaggatca
gatactctgggaacggttgtcagcctcgggacaggaaaccgctgtgtgaagggtgaggag
cttagtcttcgaggggacacagttaatgactgccacgcagaaatcatctccaggagaggc
tttatccggtttttgtacggcgagctgatgaagcattgggaaagccctggtgatgagact
atttttgaggtggcagacgatgggaagctgaagatcaaatctgacatcacctttcatctc
tatattagcactgctccatgtggcgatggtgctctgttcgataagtcttgcagcgaggca
gccgaattaaacggatctcagcacatgcctctctttgagaatgtaaaacagggcaagctc
agaaccaaggtggagaatggtgaaggcaccatcccagttgagtccagtgatattgtgccc
acctgggatggcattcagcacggtgaacgcctccgaaccatgagctgcagcgacaagatc
ctgcgctggaacgtgctcggcctacagggggcgctccttagccacttcatccaccccgtg
tatttgcgctcgataactcttgggtatctctacagccatggtcacctgactcgagcagta
tgctgccgattggctagagatggggatgcattcaaaaagagcttaccagcaaactttact
cttaatcacccagaggtgggcagggtgagtgtgtatgactccacgcggcacacaagtaag
accaaagagtccagcgttaactggagtcagccggaccagtttaccgtggaggtgctggat
ggcaccaagggcaaactggatagtcccaagatggagatatcgcgggtttccaagtccaat
ctgttccgtctcttccacgctttgtgccagcgtgcgggccgggccgatctgctggcacaa
ccgtcctacgcccatgctaagatggccgccacttcgttccaggatgccaagaggctgttc
ttcctggcgctcaaccaacatggatatggtgcctggatcgggaagcccttggaagagaaa
agtttcgagggagaagccagaagcggagtaagtggggatgcgcgggcgccgggccctccg
ggttgcgccgttgaccccaatagctgctcgggctcgaataacaacaatgttaactctgca
gcacagggcttttag
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integrated database retrieval system
