Pan troglodytes (chimpanzee): 100609326
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Entry
100609326 CDS
T01005
Symbol
AGRN
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04512
ECM-receptor interaction
ptr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100609326 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100609326 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ptr00535
]
100609326 (AGRN)
Proteoglycans [BR:
ptr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100609326 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
EGF_laminin
Kazal_CFAI
SEA
EGF
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100609326
NCBI-ProteinID:
XP_009452985
Ensembl:
ENSPTRG00000022742
VGNC:
48969
LinkDB
All DBs
Position
1:complement(230943494..230978440)
Genome browser
AA seq
2068 aa
AA seq
DB search
MAGPSHPGPLRPLLPLLVVAACVLPGAGGTCPERALERREEEANVVLTGTVEEILNVDPV
QHTYSCKVRVWRYLKGKDLVARESLLDGGNKVVISGFGDPLICDNQVSTGDTRIFFVNPA
PPYLWPAHKNELMLNSSLMRITLRNLEAVEFCVEDKPGTHFTPVPPTPPDACRGMLCGFG
AVCEPNAEGPGRASCVCKKSPCPSVVAPVCGSDASTYSNECELQRAQCSQQRRIRLLSRG
PCGSRDPCSNVTCSFGSTCARSADGLTASCLCPATCRGAPEGTVCGSDGADYPGECQLLR
RACARQENVFKKFDGPCDPCQGALPDPSRSCRVNPRTRRPEMLLRPESCPARQAPVCGDD
GVTYENDCVMGRSGAARGLLLQKVRSGQCQGRDQCPEPCRFNAVCLSRRGRPRCSCDRVT
CDGAYRPVCAQDGRTYDSDCWRQQAECRQQRAIPSKHQGPCDQAPSPCLGVQCAFGATCA
VKNGQAACECLQACSSLYDPVCGSDGVTYGSACELEATACTLGREIQVARKGPCDRCGQC
RFGALCEAETGRCVCPSECVALAQPVCGSDGHTYPSECMLHVHACTHQMGLHVASAGPCE
TCGDAVCAFGAVCSAGQCVCPRCEHPPPGPVCGSDGVTYGSACELREAACLQQTQIEEAR
AGPCEQAECGSGGSGSGEDGDCEQELCRQRGGIWDEDSEDGPCVCDFSCQSVPGSLVCGS
DGVTYSTECELKKARCESQRGLYVAAQGACRGPTFAPLPPVAPLHCAQTPYGCCQDNITA
ARGVGLAGCPSACQCNPHGSYGGTCDPATGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDG
RSGCTPCSCDPQGAVRDDCEQMTGLCSCKPGVAGPKCGQCPDGRALGPAGCEADASAPAT
CAEMRCEFGARCVEESGSAHCVCPMLTCPEANATKVCGSDGVTYGNECQLKTIACRQGLQ
ISIQSLGPCQEAVAPSTHPTSASVTVTTPGLLLSQALPAPPGALPLAPGSTARSQTTPPP
SSRPRTTASVPRTTVWPVLTVPPTAPSPAPSLVASAFGESGSTDGSSDEELSGDQEASGG
GSGGLEPFEGSSVATPGPPVERASCYNSALGCCSDGKTPSLDAEGSNCPATKVFQGVLEL
EGVEGQELFYTPEMADPKSELFGETARSIESTLDDLFRNSDVKKDFRSVRLRDLGPGKSV
RAIVDVHFDPTTAFRAPDVARALLRQIQVSRRRSLGVRRPLQEHVRFMDFDWFPAFITGA
TSGAIAAVATARATTASRLPSSSVTPRALHPSHTSQSVAKTTAAPTTRRPPTTAPSRVPG
RRPPAPQQPPKPCDSQPCFHGGTCQDWALGGGFTCSCPAGRGGAICEKVLGAPVPAFEGR
SFLAFPTLRAYHTLRLALEFRALEPQGLLLYNGNARGKDFLALALLDGRVQLRFDTGSGP
AVLTSAVPIEPGQWHRLELSRHWRRGTLSVDGETPVLGESPSGTDGLNLDTDLFVGGVPE
DQAAVALERTFVGAGLRGCIRLLDVNNQRLELGIGPGAATRGSGVGECGDHPCLPNPCHG
GAPCQNLEAGRFHCQCPSGRVGPTCADEKSPCQPNPCHGAAPCRVLPEGGAQCECPLGRE
GTFCQTASGQDGSGPFLADFNGFSHLELRGLHTFARDLGEKMALEVVFLARGPSGLLLYN
GQKTDGKGDFVSLALQDRHLEFRYDLGKGAAVIRSREPVTLGAWTRVSLERNGRKGALRV
GDGPRVLGESPKSRKVPHTVLNLKEPLYVGGAPDFSKLARAAAVSSGFDGAIQLVSLGGR
QLLTPEHVLRQVDVTSFAGHPCTRASGHPCLNGASCVPREAAYVCLCPGGFSGPHCEKGL
VEKSAGDVDALAFDGRTFVEYLNAVTESELANEIPVPETLDSGALHSEKALQSNHFELSL
RTEATQGLVLWSGKATERADYVALAIVDGHLQLSYNLGSQPVVLRSTVPVNTNRWLRVVA
HREQREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLPELPVGPALPKAYGTGFVGCL
RDVVVGRHPLHLLEDAVTKPELRPCPTP
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atggccggcccgtcccacccgggcccgctgcggccgctgctgccgctccttgtggtggcc
gcgtgcgtcctgcccggagccggcgggacatgcccggagcgcgcgctggagcggcgcgag
gaggaggcgaacgtggtgctcaccgggacggtggaggagatcctcaacgtggacccggtg
cagcacacgtactcctgcaaggttcgggtctggcggtacttgaagggcaaagacctggtg
gcccgggagagcctgctggatggcggcaacaaggtggtgatcagcggctttggagacccc
ctcatctgtgacaaccaggtgtccactggggacaccaggatcttctttgtgaaccctgca
cccccatacctgtggccagcccacaagaacgagctgatgctcaactccagcctcatgcgg
atcaccctgcggaacctggaggcggtggagttctgcgtggaagataaacccgggacccac
ttcactccagtgcctccgacgcctcctgatgcgtgccggggaatgctgtgcggcttcggc
gccgtgtgcgagcccaacgcggaggggccgggccgggcgtcctgcgtctgcaagaagagc
ccatgccccagcgtggtggcgccggtgtgtgggtcggacgcctccacctacagcaacgaa
tgcgagctgcagcgggcgcagtgcagccagcagcgccgcatccgcctgctcagccgcggg
ccgtgcggctcgcgggacccctgctccaacgtgacctgcagcttcggcagcacctgtgcg
cgctcggccgacgggctgacggcctcgtgcctgtgccccgcgacctgccgtggcgccccc
gaggggaccgtctgcggcagcgacggcgccgactaccccggcgagtgccagctcctgcgc
cgcgcctgcgcccgccaggagaatgtcttcaagaagttcgacggcccttgtgacccctgt
cagggcgccctccctgacccgagccgcagctgccgtgtgaacccgcgcacgcggcgccct
gagatgctcctacggcccgagagctgccctgcccggcaggcgccagtgtgtggggacgac
ggagtcacctacgaaaacgactgtgtcatgggccgatcgggggccgcccggggtctcctc
ctgcagaaagtgcgctccggccagtgccagggtcgagaccagtgcccggagccctgccgg
ttcaatgccgtgtgcctgtcccgccgtggccgtccccgctgctcctgcgaccgcgtcacc
tgtgacggggcctacaggcccgtgtgtgcccaggacgggcgcacgtatgacagtgattgc
tggcggcagcaggccgagtgccggcagcagcgtgccatccccagcaagcaccagggcccg
tgtgaccaggccccgtccccgtgcctcggggtgcagtgtgcatttggggcgacgtgtgct
gtgaagaacgggcaggcagcgtgtgaatgcctgcaggcgtgctcgagcctctacgatcct
gtgtgcggcagcgacggggtcacatacggcagcgcgtgcgagctggaggccacggcctgt
accctcgggcgggagatccaggtggcgcgcaaaggaccctgtgaccgctgcgggcagtgc
cgctttggagccctgtgcgaggccgagaccgggcgctgcgtgtgcccctctgaatgcgtg
gctttggcccagcccgtgtgtggctccgacgggcatacgtaccccagcgagtgcatgctg
cacgtgcacgcctgcacacaccagatgggcctgcacgtggcctcagctggaccctgcgag
acctgtggagatgccgtgtgtgcttttggggctgtgtgctcggcagggcagtgtgtgtgt
ccccggtgtgagcaccccccgcccggccccgtgtgtggcagcgacggtgtcacctacggc
agtgcctgcgagctacgggaagccgcctgcctccagcagacacagatcgaggaggcccgg
gcagggccgtgtgagcaggccgagtgcggttccggaggctctggctctggggaggacggt
gactgtgagcaggagctgtgccggcagcgcggtggcatctgggacgaggactcggaggac
gggccgtgtgtctgtgacttcagctgccagagtgtcccaggcagcctggtgtgcggctca
gatggggtcacctacagcaccgagtgtgagctgaagaaggccaggtgtgagtcacagcga
gggctctacgtagcggcccagggagcctgccgaggccccaccttcgccccgctgccacct
gtggcccccttacactgtgcccagacgccctacggctgctgccaggacaatatcaccgca
gcccggggcgtgggcctggctggctgccccagtgcctgccagtgcaacccccatggctct
tacggcggcacctgtgacccagccacaggccagtgctcctgccgcccaggtgtggggggc
ctcaggtgtgaccgctgtgagcctggcttctggaactttcgaggcatcgtcaccgatggc
cggagtggctgtacaccctgcagctgtgatccccaaggcgccgtgcgggatgactgtgag
cagatgacggggctgtgctcgtgtaagcccggggtggctggacccaagtgtgggcagtgt
ccagacggccgtgccctgggccccgcgggctgtgaagccgacgcttctgcgcctgcgacc
tgtgcggagatgcgctgtgagttcggtgcgcggtgcgtggaggagtctggctcagcccac
tgtgtctgcccgatgctcacctgtccagaggccaacgctaccaaggtctgtgggtcagat
ggagtcacgtacggcaacgagtgtcagctgaagaccatcgcctgccgccagggcctgcaa
atctctatccagagcctgggcccgtgccaggaggctgttgctcccagcactcacccgaca
tctgcctccgtgactgtgaccaccccagggctcctcctgagccaggcactgccggccccc
cccggcgccctccccctggctcccggcagtaccgcacgcagccagaccacccctccgccc
tcatcacgacctcggaccactgccagcgtccccaggaccaccgtgtggcccgtgctgacc
gtgcccccaacggcaccctcccctgcacccagcctggtggcgtccgcctttggtgaatct
ggcagcactgatggaagcagcgatgaggaactgagcggggaccaggaggccagtgggggt
ggctctggggggctcgagcccttcgagggcagcagcgtggccacccctgggccacccgtc
gagagggcttcctgctacaactcagcgttgggctgctgctctgatgggaagacgccctcg
ctggacgcagagggctccaactgccccgccaccaaggtgttccagggcgtcctggagctg
gagggcgtcgagggccaggagctgttctacacgcccgagatggctgaccccaagtcagag
ctgttcggggagacagccaggagcattgagagcaccctggacgacctcttccggaattca
gacgtcaagaaggattttcggagcgtccgcttgcgggacctggggcccggcaaatccgtc
cgcgccattgtggatgtgcactttgaccccaccacagccttcagggcacccgacgtggcc
cgggccctgctccggcagatccaggtgtccaggcgccggtccttgggcgtgaggcggccg
ctgcaggagcacgtgcgatttatggactttgactggtttcctgcgtttatcacgggggcc
acgtcaggagccattgccgcggtagccacggccagagccaccactgcatcgcgcctgccg
tcctcttctgtgacccctcgggccctgcaccccagtcacacaagccagtccgttgccaag
accacggcagcccccaccacacgtcggccccccaccactgcccccagccgtgtgcccgga
cgtcggcccccggccccccagcagcctccaaagccctgtgactcacagccctgcttccac
ggggggacctgccaggactgggccttgggcgggggcttcacctgcagctgcccagcaggc
aggggaggcgccatctgtgagaaggtgcttggcgcccctgtgccggccttcgagggccgc
tccttcctggccttccccaccctccgcgcctaccacacgctgcgcctggcactggaattc
cgcgcactggagcctcaggggctgctgctgtacaatggcaacgcccgaggcaaggacttc
ctggcattggcgctgctagatggccgcgtgcagctcaggtttgacacaggttcggggccg
gcggtgctgaccagtgccgtgccgatagagccgggccagtggcaccgcctggagctgtcc
cggcactggcgccggggcaccctctcggtggatggagagacccctgttctgggcgagagt
cccagtggcaccgacggcctcaacctggacacagacctctttgtgggcggcgtacccgag
gaccaggctgccgtggcgctggagcggaccttcgtgggcgccggcctgagggggtgcatc
cgtttgctggacgtcaacaaccagcgcctggagcttggcattgggccgggggctgccacc
cgaggctccggcgtgggcgagtgcggggaccacccctgcctgcccaacccctgccatggc
ggggccccatgccagaacctggaggctggaaggttccattgccagtgcccgtccggccgc
gtcggaccaacctgtgccgatgagaagagcccctgccagcccaacccctgccatggggcg
gcgccctgccgtgtgctgcccgagggtggtgctcagtgcgagtgccccctggggcgtgag
ggcaccttctgccagacagcctcggggcaggacggctctgggcccttcctggctgacttc
aacggcttctcccacctggagctgagaggcctgcacacctttgcacgggacctgggggag
aagatggcgctggaggtcgtgttcctggcgcgaggccccagcggcctcctgctctacaac
gggcagaagacggacggcaagggggacttcgtgtcgctggcactgcaggaccgccacctg
gagttccgctacgacctgggcaagggggcagcggtcatcaggagcagggagccagtcacc
ctgggagcctggaccagggtctcactggagcgaaacggccgcaagggtgccctgcgtgtg
ggcgacggcccccgtgtgttgggggagtccccgaaatcccgcaaggttccccacaccgtc
ctcaacctgaaggagccgctctacgtagggggggctcccgacttcagcaagctggcccgt
gctgctgccgtgtcctctggcttcgacggcgccatccagctggtctccctcggaggccgc
cagctgctgaccccggagcacgtgctgcggcaggtggacgtcacgtcctttgcaggtcac
ccctgcacccgggcctcaggccacccctgcctcaatggggcctcctgcgtcccgagggag
gctgcctatgtgtgcctgtgtcccgggggattctcaggaccgcactgcgagaaggggctg
gtggagaagtcggcgggggacgtggatgccctggcctttgacgggcggacctttgtcgag
tacctcaacgctgtgaccgagagcgaactggccaatgagatccccgtccccgaaactctg
gattccggggcccttcacagcgagaaggcactgcagagcaaccactttgaactgagcctg
cgcactgaggccacgcaggggctggtgctctggagtggcaaggccacggagcgggcagac
tacgtggcactggccattgtggacgggcacctgcagctgagctacaacctgggctcccag
cccgtggtgctgcgttccaccgtgcccgtcaacaccaaccgctggttgcgggtcgtggca
catagggagcagagggaaggttccctgcaggtgggcaatgaggcccctgtgaccggctcc
tccccgctgggcgccacgcagctggacactgatggagccctgtggcttgggggcctgccg
gagctgcccgtgggcccagcactgcccaaggcctacggcacaggctttgtgggctgcttg
cgggacgtggtggtgggccggcacccgctgcacctgctggaggacgccgtcaccaagcca
gagctgcggccctgccccaccccatga
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