Pan troglodytes (chimpanzee): 107974879
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Entry
107974879 CDS
T01005
Symbol
TARDBP
Name
(RefSeq) TAR DNA-binding protein 43
KO
K23600
TAR DNA-binding protein 43
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03015
mRNA surveillance pathway
ptr05014
Amyotrophic lateral sclerosis
ptr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107974879 (TARDBP)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
107974879 (TARDBP)
05022 Pathways of neurodegeneration - multiple diseases
107974879 (TARDBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
107974879 (TARDBP)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
107974879 (TARDBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_C
TDP-43_N
RRM_1
RRM_7
RRM_PARP14_3
RRM_3
RL
Motif
Other DBs
NCBI-GeneID:
107974879
NCBI-ProteinID:
XP_016809429
Ensembl:
ENSPTRG00000000136
ENSPTRG00000048576
VGNC:
10944
UniProt:
H2PY00
A0A6D2XRF9
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All DBs
Position
1:complement(220974548..220986253)
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AA seq
413 aa
AA seq
DB search
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNS
KQSQDEPLRSRKVFVGRCTEDMTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGNPGGFGNQGGFGNSRGGGAGLGN
NQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQNQGNMQR
EPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatatattcgggtaaccgaagatgagaacgatgagcccattgaaataccatcg
gaagacgatgggacggtgctgctctccacggttacagcccagtttccaggggcgtgtggg
cttcgctacaggaatccagtgtctcagtgtatgagaggtgtccggctggtagaaggaatt
ctgcatgcccccgatgctggctggggaaatctggtgtatgttgtcaactatccaaaagat
aacaaaagaaaaatggatgagacagatgcttcatcggcagtgaaagtgaaaagagcagtc
cagaaaacatccgatttaatagtgttgggtctcccatggaaaacaaccgaacaggacctg
aaagagtattttagtacctttggagaagttcttatggtgcaggtcaagaaagatcttaag
actggtcattcaaaggggtttggctttgttcgttttacggaatatgaaacacaagtgaaa
gtaatgtcacagcgacatatgatagatggacgatggtgtgactgtaaacttcctaattct
aagcaaagccaagatgagcctttgagaagcagaaaagtgtttgtggggcgctgtacagag
gacatgactgaggatgagctgcgggagttcttctctcagtacggggatgtgatggatgtc
ttcatccccaagccattcagggcctttgcctttgttacatttgcagatgatcagattgcg
cagtctctttgtggagaggacttgatcattaaaggaatcagcgttcatatatccaatgcc
gaacctaagcacaatagcaatagacagttagaaagaagtggaagatttggtaatccaggt
ggctttgggaatcagggtggatttggtaatagcagagggggtggagctggtttgggaaac
aatcaaggtagtaatatgggtggtgggatgaacttcggtgcgttcagcattaatccagcc
atgatggctgccgcccaggcagcactacagagcagttggggtatgatgggcatgttagcc
agccagcagaaccagtcaggcccatcaggtaataaccaaaaccaaggcaacatgcagagg
gagccaaaccaggccttcggttctggaaataactcttatagcggctctaattctggtgca
gcaattggttggggatcagcatccaatgcagggtcgggcagtggttttaatggaggcttt
ggctcaagcatggattctaagtcttctggctggggaatgtag
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