Pan troglodytes (chimpanzee): 129137476
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Entry
129137476 CDS
T01005
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03018
RNA degradation
ptr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129137476
09123 Folding, sorting and degradation
03018 RNA degradation
129137476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
129137476
03041 Spliceosome [BR:
ptr03041
]
129137476
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129137476
mRNA degradation factors
5'-3' decay
Lsm complex
129137476
Spliceosome [BR:
ptr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129137476
Complex C
U2 snRNP components
129137476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DNA_pol3_tau_5
TIG_SUH
Motif
Other DBs
NCBI-GeneID:
129137476
NCBI-ProteinID:
XP_054525559
LinkDB
All DBs
Position
18:76502078..76507364
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AA seq
135 aa
AA seq
DB search
MADDVDQQQTTNTVEDPLDLRLTPEERICVKMRNDRELRGRLHTYDQHLNMILGDVEETV
TTIEIDEETYEETYESTKQNIPVPLVRGDGIFLVAPPMRVAETKNLSCMENRRLCTVASL
NVQDTQKRNPHTFGY
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgacgtagaccagcagcaaactaccaacactgtggaggaccccctggatctt
aggctcaccccagaggaacgaatttgtgtgaaaatgagaaacgaccgagagcttcgaggc
agattacatacttatgatcaacatttaaatatgatcttgggagacgtggaagaaactgtg
actactatagaaattgatgaggaaacatatgaagagacatatgaatcaacaaaacagaat
attccagtgccccttgtccggggagatggcattttcctggttgcccctccaatgagagtt
gctgaaacaaagaatttgtcctgtatggaaaataggagactttgtacagtggcctctcta
aatgtgcaagatactcaaaagagaaacccgcatacatttggatattaa
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