Pan troglodytes (chimpanzee): 450468
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Entry
450468 CDS
T01005
Symbol
PCDH15
Name
(RefSeq) protocadherin-15 isoform X1
KO
K16500
protocadherin-15
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
450468 (PCDH15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptr03037
]
450468 (PCDH15)
04515 Cell adhesion molecules [BR:
ptr04515
]
450468 (PCDH15)
Cilium and associated proteins [BR:
ptr03037
]
Primary cilia and associated proteins
USH complex and associated proteins
450468 (PCDH15)
Cell adhesion molecules [BR:
ptr04515
]
Cadherins
Protocadherins
450468 (PCDH15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Ig_CLSTN
Ig_Cad99C_N
Cadherin_FAT4_N
Cadherin_CELSR2_9th
CDH23_a-b
Motif
Other DBs
NCBI-GeneID:
450468
NCBI-ProteinID:
XP_054515599
Ensembl:
ENSPTRG00000048830
VGNC:
84272
LinkDB
All DBs
Position
8:complement(66201503..67954938)
Genome browser
AA seq
1944 aa
AA seq
DB search
MFRQFYLWTCLASGIILGSLSEICLGQYDDDCKLARGGPPATIVAIDEESRNGTILVDNM
LIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQC
INKKVGTIIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDID
DGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNIVLRKRLNYEDKTRYFVIIQANDRAQN
LNERRTTTTTLTVDVLDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEELNPIIV
TPPIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNRDFHQK
FDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATISDSLNL
TSPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFS
ITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYVYTDMRPGDSVIQLTAVDADEGS
NGEITYEILVGAQGDFIINKTTGLITMAPGVEMIVGRTYALTVQAADNAPPAERRNSICT
VYIEVLPPNNQSPPRFPQLMYSLEISEAMRVGAVLLNLQATDREGDSITYAIENGDPQRV
FNLSETTGILTLGKALDRESTDRYILIITASDGRPDGTSTATVNIVVTDVNDNAPVFDPY
LPRNLSVVEEEANAFVGQVKATDPDAGINGQVHYSLGNFNNLFRITSNGSIYTAVKLNRE
VRDYYELVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTILVEENLPAGTTILQ
IEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFD
IYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPA
SRVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSA
TVKILVLHPGEIPRFTQEEYRPPPVSELATKGTMVGAISAAAINQSIVYSIVSGNEEDTF
GINNITGVIYVNGPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIQDENNH
PPVFQKKFYIGGVSEDARMFTSVLRVKATDKDTGNYSVMAYRLIIPPIKEGKEGFVVETY
TGLIKTAMLFHNMRRSYFKFQVIATDDYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLV
EKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDLTVYAIDPQTNRA
IDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLAL
AFIIILCCIPAILVVLVSYRQRQAECTKTARIQAALPAAKPAAPAPAPVAAPPPPPPPPP
GAHLYEELGDSSIIFLLYHFQQSRGNNSVSEDRKHQQVVMPFSSNTIEAHKSAHVDGSLK
SNKLKAARKFTFLSDEDDLSAHNPLYKENISQVSTNSDISQRTDFVDPFSPKVQAKSKSL
RGPREKIQRLWSQSVSLPRRLMRKVPNRPEIIDLQQWQGTRQKAENENTGICTNKRGSSN
PLLTTEEANLTEKEEIRQGDTLIMKGREQLKSLSSDSSFCFPRPHFSFSTLPTVSRTVEL
KSEPNVVSSPAECSLELSPSRPCVLNSSLSRRATPICMLPVETERNMFENFAHPPNISPS
ACPLPPPSPISPPSPPPAPAPLAPPPDISPFSLFCPPPSPPSTFFPLSISTSGPPTPPLL
PPFPTPLPPPPPSIPCPPPPSASFLSTECVCITGVECTTNMMPAEKIKSSMTQLSTTTVC
KTDPQREPKGILRHVKNLAELEKSVANMYSQIEKNYLRTNVSELQTMCPSEVTNMEITFE
QNKENLNNIVEGTEKQSHSQSTSL
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgacagttttatctctggacatgtttagcttcagggatcatcctgggctctctc
tctgaaatctgcttgggccagtatgatgatgattgcaaactagctaggggaggaccacca
gctaccatagttgctattgatgaagaaagtcggaatggtacaattctggtggacaacatg
ctgatcaaagggactgctggaggaccagaccccaccatagaactttctttaaaggataat
gtggattactgggtgttgatggatcctgttaagcaaatgcttttcctgaacagcaccgga
agagttctggatagagatccaccgatgaacatacactccattgtggtgcaggtccagtgc
atcaacaaaaaagtgggcactattatctaccatgaagtgcgaatagtggtgagagacagg
aatgacaactcacccactttcaagcatgaaagctactatgccacagtgaatgagctcact
ccagttggtaccacaatattcacaggattttcaggagacaatggagctacagatatagat
gatggaccaaatggacagatagagtatgttattcagtataatccagatgatccgacatcc
aatgacacctttgaaattcccctaatgttgactggaaatatagtgttaaggaagaggctc
aactatgaagataagactcgctactttgtcataatccaagctaatgaccgtgcccaaaat
ctgaatgagaggcgaaccaccaccaccactctcacagtggatgttctggatggagatgac
ttgggtccaatgtttcttccttgtgtccttgtgccaaacactcgtgattgccgtccactc
acttatcaagctgccatacctgagttgagaactccggaagaactgaaccccattattgtt
acgccaccaatccaagccattgatcaggaccggaatattcaaccgccatcagataggcca
ggaatcctctattccatccttgttgggactcctgaggattacccacgatttttccatatg
catcctaggacagcagaacttagtctcctggagccagtaaacagagactttcaccagaaa
tttgatttggttattaaggctgaacaagacaatggtcatcctcttcctgcctttgccagt
ctacacattgaaatactggatgaaaacaatcaaagtccatattttacaatgcccagttat
caaggctatatcctggaatctgccccagtgggagcaaccatttcggacagtctcaatttg
acctcacctttaagaatagtagctctggacaaggacatagaagatacaaaagacccagag
cttcacctttttctgaatgactacacctcagtcttcaccgtcacacagactggtattact
cgctacctcaccttacttcaaccagtggacagggaagaacagcaaacttacaccttttcg
ataacagcatttgatggtgtacaagaaagtgagccagtcatcgtcaatattcaagtgatg
gatgcaaatgataacacgccaaccttccctgaaatatcctatgatgtgtatgtttataca
gacatgagacctggggacagtgtcatacagctcactgcagtcgacgcagacgaagggtca
aatggggagatcacatatgaaatccttgttggggctcagggagacttcatcatcaataaa
acaacagggcttatcaccatggctccgggggtggaaatgatagtcgggcggacttacgca
ctcacggtccaagcagcggataatgctcctcctgcagagcgaaggaactccatctgcact
gtgtatattgaagtgcttccaccaaataatcaaagccctcctcgcttcccacagctgatg
tatagccttgaaattagtgaagccatgagggttggtgctgttttgttaaatctacaggca
actgatcgagagggagactcaataacatatgccattgagaatggagatcctcagagagtt
tttaatctttcagaaaccacggggattctaaccttagggaaagcactggacagggaaagc
actgatcgctacatactgatcatcacagcttcagatggcaggccagatgggacctcaact
gccacagtaaacatagtggtgacagatgtcaatgacaatgctccagtgtttgatccttat
ctgccaagaaatttatctgtggtggaagaagaagccaatgcctttgtgggtcaagtaaaa
gcaacagaccctgatgctggaataaatggtcaagtgcactacagtttgggtaactttaat
aatctttttcgtatcacatccaatgggagcatttacacagcagtgaagcttaacagagaa
gtcagggactactatgaacttgttgttgtggcaacagatggagcggtacaccctcgtcat
tcaactctaaccctggccatcaaggttttggacattgatgataacagtcctgtgttcacc
aattcaacatacactatccttgttgaagagaatttgccagctgggactaccatccttcaa
atagaggccaaagatgtcgaccttggagcaaatgtgtcttaccggataagaagcccagaa
gtgaagcacttttttgcactacatccatttacaggagaactatcgcttttaaggagttta
gattatgaggcatttccagaccaagaagcaagtatcacttttctggtagaggcctttgat
atttatggaacaatgccacctggtattgctactgtcacagtgattgtaaaggatatgaat
gattatcctcctgtctttagtaaacgaatatacaaagggatggtggctccggatgcagtc
aagggtacacctatcacaacagtttatgctgaagatgcagaccctcctggattacctgca
agtcgtgtgaggtatagagtagatgatgtacagtttccttaccctgccagtatttttgat
gtggaagaagattctggaagagtaataacacgagtcaatcttaatgaagaacctacaaca
atttttaagttggtggtggttgcttttgatgatggggagcctgtgatgtccagcagtgcc
acagtgaagattcttgtcttacatcctggtgagatcccacgcttcacacaggaggaatat
agacctcctccagtaagtgaacttgccaccaaagggaccatggttggtgcaatttctgct
gctgccattaatcaaagtattgtgtactccattgtttcaggaaatgaagaagatacattt
ggaattaataacatcacaggtgttatctatgtgaatggacctctggattatgagaccagg
acaagctatgtacttcgagtccaagctgattccctggaagtggtccttgccaatctccga
gttccttcaaaaagcaatacagctaaagtatacattgagattcaggatgaaaataatcat
cccccagtgtttcagaaaaaattctacatcggaggtgtatctgaagatgcaagaatgttt
acttctgtactcagagtgaaggctactgataaagatactggcaattatagtgtcatggcc
tacagactcataataccaccaattaaagagggaaaagaaggatttgtagtggaaacatat
acagggcttatcaaaactgctatgctcttccataatatgaggagatcctacttcaagttt
caagttattgcaactgacgactatgggaagggactgagcggcaaagccgatgtactcgtc
tccgtggtcaatcagctggatatgcaagtcattgtttccaatgtgcctcctactctagtg
gaaaaaaagatagaagatcttacagagatcttggatcgctatgttcaggaacaaattcct
ggtgccaaggtcgtagtggagtccattggagctcgccggcatggagatgccttttcccta
gaagattacaccaaatgtgacttgactgtctatgcaattgacccccaaaccaacagagcc
atcgatagaaatgagctttttaaatttttggatggcaaactacttgatatcaataaagac
tttcagccgtattatggggaaggaggacgcattctggagatccggactccagaggcagtg
accagcattaaaaagagaggagaaagtctaggatacacagaaggggccttgttggctctg
gccttcatcatcatcctctgctgcattcctgccatcttggtggttttggtcagctacaga
caacgtcaagctgagtgtacaaagactgcacgaattcaggccgcattacccgcggctaaa
ccagcagcgccggcccctgcaccagtggcagcgcccccgccgccgccgccgcctccgcca
ggtgcgcatctctatgaagaacttggagacagctcaattattttccttctctaccatttt
caacaaagcaggggaaataactcagtctcagaagacaggaaacatcaacaagttgtgatg
cccttttcttccaatactattgaggctcacaagtcagctcatgtagacggatcacttaag
agcaacaaactgaaggctgcaagaaaattcacatttctatctgatgaggatgacttaagt
gcccataatcccctttataaggaaaacataagtcaagtatcaacaaattcagacatttca
cagagaacagattttgtagacccattttcacccaaagtacaagccaagagtaagtctctg
aggggcccaagagaaaagattcagaggctgtggagtcagtcagtcagcttacccaggagg
ctgatgaggaaagttccaaatagaccagagatcatagatctgcagcagtggcaaggcacc
aggcagaaagctgaaaatgaaaacactggaatctgtacaaacaaaagaggtagcagcaat
ccattgcttacaactgaagaggcaaatttgacagagaaagaggaaataaggcaaggtgac
acactgattatgaaaggaagagaacagttgaaatctctctcttcagactcttcattttgc
tttcccaggcctcacttctcattctccactttgccaactgtttcaagaactgtggaactc
aaatcagaacctaatgtcgtcagttctcctgctgagtgttccttggaactttctccttca
aggccttgtgttttaaattcttcactctctaggagagcgacacctatttgtatgttacct
gttgaaaccgaaagaaatatgtttgaaaattttgcccatccaccaaacatctctccttct
gcctgtccccttcctcctccttctcctatttctcctccttctcctcctcctgctcctgct
cctcttgctcctcctcctgacatttctcctttttctcttttttgtcctcctccctctcct
ccttctacattttttccactttccatttcaacgtctggtcccccaacaccacctcttcta
cctccatttccaactcctcttcctccaccacctccttctattccttgccctccacctcct
tcagcttcatttctgtccacagagtgtgtctgtataacaggtgttgaatgcacgaccaac
atgatgcctgctgagaaaattaagtcctctatgacacagctatcaacaacgacagtgtgt
aaaacagaccctcagagagaaccaaaaggcatcctcagacatgttaaaaacttagcagaa
cttgaaaaatcagtagctaacatgtacagtcaaatagaaaaaaactatctacgcacaaat
gtttcagaacttcaaactatgtgcccttcggaagtaacaaatatggaaatcacatttgaa
caaaacaaggagaatttgaacaatattgtcgagggaactgaaaaacaatctcacagtcaa
tctacttcactgtaa
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