Pan troglodytes (chimpanzee): 452653
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Entry
452653 CDS
T01005
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X2
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
452653 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptr03400
]
452653 (LIG4)
Enzymes [BR:
ptr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
452653 (LIG4)
DNA repair and recombination proteins [BR:
ptr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
452653 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
452653
NCBI-ProteinID:
XP_063648387
Ensembl:
ENSPTRG00000006025
VGNC:
10471
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All DBs
Position
14:complement(113803908..113814872)
Genome browser
AA seq
923 aa
AA seq
DB search
MATPQETIKISFYSWDSLVHRGNGACPRPDLCSTLERIQKSKGRAEKIRHFREFLDSWRK
FHDALHKNHKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALK
LLNYRTPTGTHGDAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSIASNNSAKRKDLIK
KSLLQLITQSSALEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQL
HDPSVGLSDISITLFSAFKPMLAAIANIEHIEKDMKHQSFYIETKLDGERMQMHKDGDVY
KYFSRNGYNYTDQFGASSTEGSLTPFIHNAFKADIQICILDGEMMAYNPNTQTFMQKGTK
FDIKRMVEDSDLQTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEIVQKTQA
HTKNEVIDALNEAIDKREEGIMVKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVG
GYWGKGSRGGMMSHFLCAVAEKPPPGEKPSVFHTLSRVGSGCTMKELYDLGLKLAKYWKP
FHRKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDK
EWHECMTLDDLEQLRGKASGKLASKHLYIGGDDEPQEKRRKAAPKMKKVIGIIEHLKAPN
LTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSKNIR
VKNIISSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFAREYDCYGDSYFID
TDLNQLKEVFSGIKNSNEQTPEEMASLIADLEYRYSWDCSPLSMFRRHTVYLDSYAVIND
LSTKNEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKI
LKESWVTDSIDKCELQEENQYLI
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccgcaggaaaccatcaagatctcattttacagctgggattctctggttcac
agaggtaacggagcttgcccgaggccagatttgtgttcaactttagaacgaatacagaaa
agtaaaggacgtgcagaaaaaatcagacacttcagggaatttttagattcttggagaaaa
tttcatgatgctcttcataagaaccacaaagatgtcacagactctttttatccagcaatg
agactaattcttcctcagctagaaagagagagaatggcctatggaattaaagaaactatg
cttgctaagctttatattgagttgcttaatttacctagagacggaaaagatgccctcaaa
cttttaaactacagaacacccactggaactcatggagatgctggagactttgcaatgatt
gcatattttgtgttgaagccaagatgtttacagaaaggaagtttaaccatacagcaagta
aacgaccttttagactcaattgccagcaataattctgctaaaagaaaagacctaataaaa
aagagccttcttcaacttataactcagagttcagcacttgagcaaaagtggcttatacgg
atgatcataaaggatttaaagcttggtgttagtcagcaaactatcttttctgtttttcat
aatgatgctgctgagttgcataatgtcactacggatctggaaaaagtctgtaggcaactg
catgatccttctgtaggactcagtgatatttctatcactttattttctgcctttaaacca
atgctagctgctattgcaaatattgagcacattgagaaggatatgaaacatcagagtttc
tacatagaaaccaagctagatggcgaacgtatgcaaatgcacaaagatggagatgtatat
aaatacttctctcgaaatggatataactacactgatcagtttggtgcttcttctaccgaa
ggttctcttaccccattcattcataatgcattcaaagcagatatacaaatctgtattctt
gatggtgagatgatggcctataatcctaatacacaaactttcatgcaaaagggaactaag
tttgatattaaaagaatggtagaggattctgatctgcaaacttgttattgtgtttttgat
gtattgatggttaataataaaaagctagggcatgagactctgagaaagaggtatgagatt
cttagtagtatttttacaccaattccaggtagaatagaaatagtgcagaaaacacaagct
catactaagaatgaagtaattgatgcattgaatgaagcaatagataaaagagaagaggga
attatggtaaaacaacctctatccatctacaagccagacaaaagaggtgaagggtggtta
aaaattaaaccagagtatgtcagtggactaatggatgaattggacattttaatcgttgga
ggatattgggggaaaggatcacggggtggaatgatgtctcattttctgtgtgcagtagca
gagaagccccctcctggtgagaagccgtctgtgtttcatactctctctcgtgttggctct
ggctgcaccatgaaagaactgtatgatctgggtttgaaattggccaagtattggaagccg
tttcatagaaaagctccaccaagcagcattttatgtggaacagagaagccagaagtgtac
attgaaccttgtaattctgtcattgttcagattaaggcagcagagatcgtacccagtgat
atgtataaaactggctgcaccttgcgttttccacgaattgaaaagataagagatgacaag
gagtggcatgagtgcatgaccctggacgacctagaacaacttagggggaaggcatctggt
aagctcgcatctaaacacctttatataggtggtgatgatgaaccacaagaaaaaaggcgg
aaagctgccccaaagatgaagaaagttattggaattattgagcacttaaaagcacctaac
cttactaacgttaacaaaatttctaatatatttgaagatgtagagttttgtgttatgagt
ggaacagatagccagccaaagcctgacctggagaacagaattgcagaatttggtggttat
atagtacaaaatccaggcccagacacgtactgtgtaattgcagggtctaagaacatcaga
gtgaaaaacataatttcgtcaaataaacatgatgtcgtcaagcctgcatggcttttagaa
tgttttaagaccaaaagctttgtaccatggcagcctcgctttatgattcatatgtgccca
tcaaccaaagaacattttgcccgtgaatatgattgctatggtgatagttatttcattgat
acagacttgaaccaactgaaggaagtattctcaggaattaaaaattctaacgagcagact
cctgaagaaatggcttctctgattgctgatttagaatatcggtattcctgggattgctct
cctctcagtatgtttcgacgccacaccgtttatttggactcgtatgctgttattaatgac
ctgagtaccaaaaatgaggggacaaggttagctattaaagccttggagcttcggtttcat
ggagcaaaagtagtgtcttgtttagctgagggagtgtctcatgtaatcattggggaagat
catagtcgtgttgcagattttaaagcttttagaagaacttttaagagaaagtttaaaatc
ctaaaagaaagttgggtaactgattcaatagacaagtgtgaattacaagaagaaaaccag
tatttgatttaa
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