Pan troglodytes (chimpanzee): 454738
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Entry
454738 CDS
T01005
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
454738 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptr03041
]
454738 (EFTUD2)
Spliceosome [BR:
ptr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
454738 (EFTUD2)
Complex C
U5 SnRNP specific factors
454738 (EFTUD2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
454738
NCBI-ProteinID:
XP_001145980
Ensembl:
ENSPTRG00000009287
VGNC:
9432
UniProt:
H2QD78
A0A6D2W4J1
LinkDB
All DBs
Position
19:22932728..22981297
Genome browser
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacttatatgatgagtttgggaattatattggaccagagcttgattctgat
gaagatgatgatgaattgggtagagagaccaaagatcttgatgagatggatgatgatgac
gacgacgatgacgtaggagatcatgacgatgaccaccccgggatggaggtggtgctgcat
gaggacaagaagtactacccaacagccgaggaggtgtatggtcctgaggtggagaccata
gttcaagaggaagacactcagcctctcacagaacccattattaagccagtgaaaaccaag
aaattcactctgatggagcagacattacctgttacggtgtatgagatggatttcttggcg
gatctgatggataactcagagctcatcagaaatgtgaccctttgtggacatctccaccat
ggcaagacatgttttgtggattgtttaattgaacagactcacccggaaatcagaaagcgc
tatgaccaagatctgtgctatactgacatcctcttcacagagcaagagagaggtgtaggc
atcaaaagcactcctgtgacagtggtcttgccagacaccaaaggaaaatcttatctcttc
aatatcatggacactccaggacatgtgaatttctctgatgaggtcacagctggcttgcgc
atctcagatggagtggtccttttcattgatgctgctgagggggtgatgctgaacacagag
cggctgatcaagcatgcggtgcaggagaggctggcagtcactgtgtgcatcaacaagatt
gaccggctgatcctggagctgaagctgcctccaactgatgcttattacaagctgcgccac
attgtggatgaggtcaatggattaataagcatgtattccactgatgagaacctgatcctt
tccccactcctgggtaacgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctacgccgacacctttggtgacattaattaccaagaatttgct
aaaagactctggggtgacatctacttcaaccctaagacgcgaaagttcaccaaaaaggcc
ccaactagcagctcccagagaagtttcgtggagtttatcttggagcccctttataagatc
ctcgcccaggttgtaggtgacgtggacaccagcctcccacggaccctagacgagcttggc
atccacctgacgaaggaggagctgaagctgaacatccgccccttgctcaggctggtctgc
aaaaagttctttggcgagttcacaggctttgtggacatgtgtgtgcagcatatcccttct
ccaaaggtgggcgccaagcccaagattgagcacacctacaccggtggtgtggactccgac
ctcggcgaggctatgagtgactgtgaccctgatggccccctgatgtgccacactactaag
atgtacagcacagatgatggagtccagtttcacgcctttggccgggtgctgagtggcacc
attcatgctgggcagcctgtgaaggtactgggggagaactacaccctggaggatgaggaa
gactcccagatatgcaccgtgggccgcctttggatctctgtggccaggtaccacatcgag
gtgaaccgtgttcctgctggcaactgggttctgattgaaggtgttgatcaaccaattgtg
aagacagcaaccataaccgaaccccgaggcaatgaggaggctcagattttccgacccttg
aagttcaataccacatctgttatcaagattgctgtggagccagtcaacccctcagagctg
cccaagatgcttgatggcctgcgcaaggtcaacaagagctatccatccctcaccaccaag
gtggaggagtctggcgagcatgtgatcctgggcaccggggagctctacctggactgtgtg
atgcatgatttgcggaagatgtactcagagatagacatcaaggtggctgacccagttgtc
acgttttgtgagacggtggtggaaacatcctccctcaagtgttttgctgaaacgcctaat
aagaagaacaagatcaccatgattgctgagcctcttgagaagggcctggcagaggacata
gagaatgaggtggtccagattacgtggaacaggaagaagctgggagagttcttccagacc
aagtacgattgggatctgctggctgcccgttccatctgggcttttggccctgatgcgacc
ggccccaacattctggtggatgatactctgccctctgaggtggacaaggctcttcttggt
tcagtgaaggacagcatcgttcaaggtttccagtggggaaccagggagggccccctctgt
gatgaattgattcggaatgtcaagtttaagatcctggatgcggtggttgcccaggagccc
ctgcaccggggcgggggccagatcatccccacagccaggagagtcgtctactctgccttc
ctcatggctactcctcgtctgatggagccttactactttgtagaggtccaggcccctgca
gattgcgtctctgcagtttataccgtcctggccaggcgcagggggcacgtgactcaggat
gcacccatcccaggctcccctctgtacaccatcaaagcttttatcccggccatcgactct
tttggctttgagactgatctccggactcacacccagggacaagccttttctctgtctgtc
ttccaccactggcagattgtgcctggtgatcccctggacaagagcattgtcatccgcccc
ttggagccacagccagctcctcacctggcccgggaattcatgatcaaaacccgccgtagg
aagggcctcagtgaagatgtgagcatcagcaaattcttcgatgatcctatgttgctggaa
cttgccaaacaggatgttgtgctcaattaccccatgtga
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