Pan troglodytes (chimpanzee): 465031
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Entry
465031 CDS
T01005
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04140
Autophagy - animal
ptr05014
Amyotrophic lateral sclerosis
ptr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
465031 (C9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
465031 (C9orf72)
05022 Pathways of neurodegeneration - multiple diseases
465031 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptr04131
]
465031 (C9orf72)
Membrane trafficking [BR:
ptr04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
465031 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
465031
NCBI-ProteinID:
XP_001155133
Ensembl:
ENSPTRG00000020839
VGNC:
4638
UniProt:
H2QX41
A0A6D2WCS7
LinkDB
All DBs
Position
11:88238492..88383162
Genome browser
AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAECGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIILEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFQLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactctttgcccaccgccatctccagctgttgccaagacagagattgctttaagt
ggcgaatcacctttattagcagctacttttgcttactgggacaatattcttggtcctaga
gtaaggcacatttgggctccaaagacagaacaggtacttctcagtgatggagaaataact
tttcttgccaaccacactctaaatggagaaatccttcgaaatgcagagtgtggtgctata
gatgtaaagttttttgtcttatctgaaaagggagtgattattgtttcattaatctttgat
ggaaactggaatggggatcgcagcacatatggactatcaattatacttccacagacagaa
cttagtttctacctcccacttcatagagtgtgtgttgatagattaacacatataatccgg
aaaggaagaatatggatgcataaggaaagacaagaaaatgtccagaagattatcttagaa
ggcacagagagaatggaagatcagggtcagagtattattccaatgcttactggagaagtg
attcctgtaatggaactgctttcatctatgaaatcacacagtgttcctgaagaaatagat
atagctgatacagtactcaatgatgatgatattggtgacagttgtcatgaaggctttctt
ctcaatgccatcagctcacacttgcaaacctgtggctgttccgttgtagtaggtagcagt
gcagagaaagtaaataagatagtcagaacattatgcctttttctgactccagcagagaga
aaatgctccaggttatgtgaagcagaatcatcatttaaatatgagtcagggctctttgta
caaggcctgctaaaggattcaactggaagctttgtgctgcctttccggcaagtcatgtat
gctccatatcccaccacacacatagatgtggatgtcaatactgtgaagcagatgccaccc
tgtcatgaacatatttataatcagcgtagatacatgagatccgagctgacagccttctgg
agagccacttcagaagaagacatggctcaggatacgatcatctacactgacgaaagcttt
actcctgatttgaatatttttcaagatgtcttacacagagacactctagtgaaagccttc
ctggatcaggtctttcagctgaaacctggcttatctctcagaagtactttccttgcacag
tttctacttgtccttcacagaaaagccttgacgctaataaaatatatagaagacgatacg
cagaagggaaaaaagccctttaaatctcttcggaacctgaagatagaccttgatttaaca
gcagagggcgatcttaacataataatggctctggctgagaaaattaaaccaggcctacac
tcttttatctttggaagacctttctacactagtgtgcaagaacgagatgttctaatgact
ttttaa
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