Pan troglodytes (chimpanzee): 471294
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Entry
471294 CDS
T01005
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3 isoform X4
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04360
Axon guidance
ptr05017
Spinocerebellar ataxia
ptr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
471294 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
471294 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
471294 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptr04040
]
471294 (TRPC3)
Ion channels [BR:
ptr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
471294 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
471294
NCBI-ProteinID:
XP_054539330
Ensembl:
ENSPTRG00000016412
VGNC:
7428
LinkDB
All DBs
Position
3:complement(123070964..123143388)
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AA seq
893 aa
AA seq
DB search
MSTKVRKCKEQARVTFPAPEEEEDEGEDEGAEPQRRRRGWRGVNGGLETRSAPSQREPHG
YCPPPFSHGPDLSMEGSPSLRRMTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDAA
EYGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALL
LAISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILA
AHCQKYEVVHMLLMKGARIERPHDYFCKCGDCMEKQRHDSFSHSRSRINAYKGLASPAYL
SLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAIL
NGDLESAEPLEVHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIA
IKCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDR
FEGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQ
LWNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQYFTYARD
KWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMV
FFAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIG
YVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPF
SLVPSPKSFVYFIMRIVNFPKCRRRRLQKDIEMGMGNSKSRQIMKRLIKRYVLKAQVDKE
NDEVNEGELKEIKQDISSLRYELLEDKSQATEELAILIHKLSEKLNPSMLRCE
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcaggaagtgcaaggaacaagcaagggtgaccttccccgcgccggag
gaggaggaagacgagggcgaggacgagggcgcggagccgcagcgccgccgccggggctgg
aggggcgtcaacggggggctggagacgcgctcggcgccctcgcagcgggagccgcacggc
tactgcccgccgcccttctcccacgggccggacctgtccatggagggaagcccatccctg
agacgcatgacagtgatgcgggagaagggccggcgccaggctgtcaggggcccggccttc
atgttcaatgaccgcggcaccagcctcaccgccgaggaggagcgcttcctcgacgccgcc
gagtacggcaacatcccagtggtgcgcaagatgctggaggagtccaagacgctgaacgtc
aactgcgtggactacatgggccagaacgcgctgcagctggctgtgggcaacgagcacctg
gaggtgaccgagctgctgctcaagaaggagaacctggcgcgcattggcgacgccctgctg
ctcgccatcagcaagggctacgtgcgcatcgtagaggccatcctcaaccaccctggcttc
gcggccagcaagcgtctcactctgagcccctgtgagcaggagctgcaggacgacgacttc
tacgcttacgacgaggacggcacgcgcttctcgccggacatcacccccatcatcctggcg
gcgcactgccagaaatacgaagtggtgcacatgctgctgatgaagggtgccaggatcgag
cggccgcacgactatttctgcaagtgcggggactgcatggagaagcagaggcacgactcc
ttcagccactcacgctcgaggatcaatgcctacaaggggctggccagcccggcttacctc
tcattgtccagcgaggacccggtgcttacggccctagagctcagcaacgagctggccaag
ctggccaacatagagaaggagttcaagaatgactatcggaagctctccatgcaatgcaaa
gactttgtagtgggtgtgctggatctctgccgagactcagaagaggtagaagccattctg
aatggagatctggaatcagcagagcctctggaggtacacaggcacaaagcttcattaagt
cgtgtcaaacttgccattaagtatgaagtcaaaaagtttgtggctcatcccaactgccag
cagcagctcttgacgatctggtatgagaacctctcaggcctaagggagcagaccatagct
atcaagtgtctcgttgtgctggtcgtggccctgggccttccattcctggccattggttac
tggatcgcaccttgcagcaggctggggaaaatcctgcgaagcccttttatgaagtttgta
gcacatgcagcttctttcatcatcttcctgggtctgcttgtgttcaatgcctcagacagg
ttcgaaggcatcaccacgctgcccaatatcacagttattgactatcccaaacagatcttc
agggtgaaaaccacccagtttacatggactgaaatgctaattatggtctgggttcttgga
atgatgtggtctgaatgtaaagagctctggctggaaggacctagggaatacattttgcag
ttgtggaatgtgctcgactttgggatgctgtccatcttcattgctgctttcacagccaga
ttcctagctttccttcaggcaacgaaggcacaacagtatgtggacagttacgtccaagag
agtgacctcagtgaagtgacactcccaccagagatacagtatttcacttatgctagagat
aaatggctcccttctgacccgcagattatatctgaaggcctttatgccatagctgttgtg
ctcagcttctctcggattgcgtacatcctccctgcaaatgagagctttggccccctgcag
atctctcttggaaggactgtaaaggacatattcaagttcatggtcctctttattatggtg
ttttttgcctttatgattggcatgttcatactttattcttactaccttggggctaaagta
aatgctgcttttaccactgtagaagaaagtttcaagactttattttggtcaatatttggg
ttgtctgaagtgacttccgttgtgctcaaatatgatcacaaattcatagaaaatattgga
tacgttctttatggaatatacaatgtaactatggtggtcgttttactcaacatgctaatt
gctatgattaatagctcatatcaagaaattgaggatgacagtgatgtagaatggaagttt
gctcgttcaaaactttggttatcctattttgatgatggaaaaacattacctccacctttc
agtctagttcctagtccaaaatcatttgtttatttcatcatgcgaatcgttaactttccc
aaatgcagaaggagaaggcttcagaaggatatagaaatgggaatgggtaactcaaagtcc
aggcagataatgaaaagacttataaagcggtatgttttgaaagcacaagtagacaaagaa
aatgatgaagttaatgaaggtgaattaaaagaaatcaagcaagatatctccagccttcgt
tatgaacttttggaagacaagagccaagcaactgaggaattagccattctaattcataaa
cttagtgagaaactgaatcccagcatgctgagatgtgaatga
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