KEGG   Pan troglodytes (chimpanzee): 471976
Entry
471976            CDS       T01005                                 
Symbol
PATR-DQA2
Name
(RefSeq) HLA class II histocompatibility antigen, DQ alpha 2 chain
  KO
K06752  MHC class II antigen
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr04145  Phagosome
ptr04514  Cell adhesion molecules
ptr04612  Antigen processing and presentation
ptr04640  Hematopoietic cell lineage
ptr04658  Th1 and Th2 cell differentiation
ptr04659  Th17 cell differentiation
ptr04672  Intestinal immune network for IgA production
ptr04940  Type I diabetes mellitus
ptr05140  Leishmaniasis
ptr05145  Toxoplasmosis
ptr05150  Staphylococcus aureus infection
ptr05152  Tuberculosis
ptr05164  Influenza A
ptr05166  Human T-cell leukemia virus 1 infection
ptr05168  Herpes simplex virus 1 infection
ptr05169  Epstein-Barr virus infection
ptr05310  Asthma
ptr05320  Autoimmune thyroid disease
ptr05321  Inflammatory bowel disease
ptr05322  Systemic lupus erythematosus
ptr05323  Rheumatoid arthritis
ptr05330  Allograft rejection
ptr05332  Graft-versus-host disease
ptr05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    471976 (PATR-DQA2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    471976 (PATR-DQA2)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    471976 (PATR-DQA2)
   04612 Antigen processing and presentation
    471976 (PATR-DQA2)
   04658 Th1 and Th2 cell differentiation
    471976 (PATR-DQA2)
   04659 Th17 cell differentiation
    471976 (PATR-DQA2)
   04672 Intestinal immune network for IgA production
    471976 (PATR-DQA2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    471976 (PATR-DQA2)
   05164 Influenza A
    471976 (PATR-DQA2)
   05168 Herpes simplex virus 1 infection
    471976 (PATR-DQA2)
   05169 Epstein-Barr virus infection
    471976 (PATR-DQA2)
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    471976 (PATR-DQA2)
   05152 Tuberculosis
    471976 (PATR-DQA2)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    471976 (PATR-DQA2)
   05140 Leishmaniasis
    471976 (PATR-DQA2)
  09163 Immune disease
   05310 Asthma
    471976 (PATR-DQA2)
   05322 Systemic lupus erythematosus
    471976 (PATR-DQA2)
   05323 Rheumatoid arthritis
    471976 (PATR-DQA2)
   05320 Autoimmune thyroid disease
    471976 (PATR-DQA2)
   05321 Inflammatory bowel disease
    471976 (PATR-DQA2)
   05330 Allograft rejection
    471976 (PATR-DQA2)
   05332 Graft-versus-host disease
    471976 (PATR-DQA2)
  09166 Cardiovascular disease
   05416 Viral myocarditis
    471976 (PATR-DQA2)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    471976 (PATR-DQA2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ptr04147]
    471976 (PATR-DQA2)
Exosome [BR:ptr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   471976 (PATR-DQA2)
  Exosomal proteins of epithelial cells
   471976 (PATR-DQA2)
  Exosomal proteins of breast milk
   471976 (PATR-DQA2)
SSDB
Motif
Pfam: MHC_II_alpha C1-set C2-set_2 Ig_3 WW SH3_YKFC_2nd
Other DBs
NCBI-GeneID: 471976
NCBI-ProteinID: XP_054541658
Ensembl: ENSPTRG00000034186
LinkDB
Position
5:38627723..38633509
AA seq 255 aa
MILNKALLLGALALTAVMSPCGGEDIVADHVASYGVNFYQSHGPSGQYTHEFDGDEEFYV
DLETKETVWQLPMFSKFISFDPQSALRNMAVGKHTLEFMIKQSNSTAATNEVPEVTVFSK
FPVTLDQPNTLICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKISYLTFL
PSADEIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTGTLVCALGLSAGLMGIVVGTVFII
QGLHSVGASRHQGLL
NT seq 768 nt   +upstreamnt  +downstreamnt
atgatcctaaacaaagctctgctgctgggggccctcgccctgactgccgtgatgagcccc
tgtggaggtgaagacattgtggctgaccatgttgcctcctatggtgtgaacttctaccag
tctcacggtccctctggccagtacacccatgaatttgatggagacgaggagttctacgtg
gacctggagacgaaagagactgtctggcagttgcctatgtttagcaaatttataagtttt
gacccgcagagtgcactgagaaatatggctgtgggaaaacacaccttggaattcatgatt
aaacagtccaactctaccgctgccaccaatgaggttcctgaggtcacagtgttttccaag
tttcctgtgacgctggatcagcccaacaccctcatctgtcttgtggacaacatctttcct
cctgtggtcaacatcacatggctgagcaatgggcactcagtcacagaaggtgtttctgag
accagcttcctctccaagagtgatcattccttcttcaagatcagttacctcaccttcctc
ccttctgctgatgagatttatgactgcaaggtggaacactggggcctggacgagcctctt
ctgaaacactgggagcctgagattccagcccctatgtcagagctcacagggactttggtc
tgcgccctggggttgtctgcgggcctcatgggcattgtggtgggcactgtcttcatcatc
caaggcctgcattcagttggtgcttccagacaccaagggctcttgtga

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