Pan troglodytes (chimpanzee): 743891
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Entry
743891 CDS
T01005
Symbol
APOBEC3B
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3B
KO
K18750
C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03250
Viral life cycle - HIV-1
ptr05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
743891 (APOBEC3B)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
743891 (APOBEC3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
743891 (APOBEC3B)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
743891 (APOBEC3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAD2
APOBEC2
NAD1
APOBEC_N
SNAD4
APOBEC3
APOBEC_C
APOBEC4_like
APOBEC4
APOBEC1
dCMP_cyt_deam_1
Viral_Rep
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
743891
NCBI-ProteinID:
NP_001276568
Ensembl:
ENSPTRG00000014384
VGNC:
12807
UniProt:
K7AN26
LinkDB
All DBs
Position
23:40985214..40995104
Genome browser
AA seq
382 aa
AA seq
DB search
MNPQIRNPMEWMYQRTFYYNFENEPILYGRSYTWLCYEVKIRRGHSNLLWDTGVFRGQMY
SQPEHHAEMCFLSWFCGNQLSAYKCFQITWFVSWTPCPDCVAKLAKFLAEHPNVTLTISA
ARLYYYWERDYRRALCRLSQAGARVKIMDDEEFAYCWENFVYNEGQPFMPWYKFDDNYAF
LHRTLKEIIRHLMDPDTFTFNFNNDPLVLRRHQTYLCYEVERLDNGTWVLMDQHMGFLCN
EAKNLLCGFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGQVRAFLQEN
THVRLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFEYCWDTFVYRQGCPFQPWD
GLEEHSQALSGRLRAILQNQGN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaatccacagatcagaaatccgatggagtggatgtatcaacgcacattctactacaac
tttgaaaacgaacccatcctctatggtcggagctacacctggctgtgctatgaagtgaaa
ataaggaggggccactcaaatctcctttgggacacaggggtctttcgaggccagatgtat
tcccagcctgagcaccacgcagaaatgtgcttcctctcttggttctgtggcaaccagctg
tctgcttacaagtgtttccagatcacctggtttgtatcctggacaccctgcccggactgt
gtggcgaagctggccaaattcctggctgagcaccccaatgtcaccctgaccatctccgcc
gcccgcctctactactactgggaaagagattaccgaagggcgctctgcaggctgagtcag
gcaggagcccgcgtgaagatcatggacgatgaagaatttgcatactgctgggaaaacttt
gtgtacaatgaaggtcagccattcatgccttggtacaaattcgatgacaattatgcattc
ctgcaccgcacgctaaaggagattatcagacacctgatggatccagacacattcactttc
aactttaacaatgaccctttggtccttcgacggcaccagacctacttgtgctatgaggtg
gagcgcctggacaatggcacctgggtcctgatggaccagcacatgggctttctatgcaac
gaggctaagaatcttctctgtggcttttacggccgccatgcggagctgcgcttcttggac
ctggttccttctttgcagttggacccggcccagatctacagggtcacttggttcatctcc
tggagcccctgcttctcctggggctgtgccggacaagtgcgtgcgttccttcaggagaac
acacacgtgagactgcgcatcttcgctgcccgcatctatgattacgaccccctatataag
gaggcgctgcaaatgctgcgggatgctggggcccaagtctccatcatgacctacgatgag
tttgagtactgctgggacacctttgtgtaccgccagggatgtcccttccagccctgggat
ggactagaggagcacagccaagccctgagtgggaggctgcgggccattctccagaatcag
ggaaactga
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