Panicum virgatum (switchgrass): 120671321
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Entry
120671321 CDS
T07260
Name
(RefSeq) thiamine thiazole synthase 2, chloroplastic
KO
K03146
cysteine-dependent adenosine diphosphate thiazole synthase [EC:
2.4.2.60
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00730
Thiamine metabolism
pvir01100
Metabolic pathways
pvir01240
Biosynthesis of cofactors
Module
pvir_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
120671321
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.60 cysteine-dependent adenosine diphosphate thiazole synthase
120671321
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Motif
Pfam:
Thi4
FAD_binding_2
DAO
NAD_binding_8
Pyr_redox_2
NAD_binding_9
Lycopene_cycl
GIDA
FAD_oxidored
HI0933_like
Pyr_redox_3
FAD_binding_3
Motif
Other DBs
NCBI-GeneID:
120671321
NCBI-ProteinID:
XP_039807558
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Position
4N:43061674..43063198
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AA seq
350 aa
AA seq
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MATTASTLLKSSFAGARLPAAPRAPSSVAVAAPRGAGPICASASSSSPPYDLTSFRFSPI
KESVVAREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPSVSIAIVEQSVSPGG
GAWLGGQLFSAMVVRKPAHRFLDELGVAYDEAEDYVVIKHAALFTSTIMSRLLARPNVKL
FNAVAVEDLIVKQGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATG
VKRLQDIGMISAVPGMKALDMNTAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFG
AMMISGQKAAHLALKALGRPNAIDGTAPAASPAWREEFVMSSKDDEVVDA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaccgcgtcgaccctcctcaagtcctccttcgccggcgcccggctcccggcc
gccccgcgcgccccgtcctccgtcgccgtggcggccccgcgcggcgccgggcccatctgc
gcctcggcctcctcctccagcccgccctacgacctcacgtccttccggttcagccccatc
aaggagtccgtcgtcgcccgcgagatgacccgccggtacatgaccgacatgatcacccac
gccgacaccgacgtcgtcatcgtgggcgccggctccgcggggctctcctgcgcgtacgag
ctctccaaggacccctccgtcagcatcgccatcgtggagcagtccgtgtccccgggcggc
ggcgcctggctcggcggccagctcttctcggccatggtggtgcgcaagcccgcccaccgc
ttcctcgacgagctgggcgtcgcgtacgacgaggccgaggactacgtcgtcatcaagcac
gccgcgctcttcacctccaccatcatgagccgcctcctggcgcgccccaacgtgaagctc
ttcaacgccgtcgccgtcgaggacctcatcgtcaagcagggccgcgtcggcggcgtggtc
accaactgggccctcgtctccatgaaccacgacacccagtcctgcatggaccccaacgtg
atggaggccaaggtcgtggtcagctcctgcggccacgacgggccgttcggggccaccggc
gtcaagaggctgcaggacatcggcatgatcagcgccgtgcccgggatgaaggccctggac
atgaacaccgccgaggacgagatcgtccgcctcacgcgtgaggtcgtgcccggcatgatc
gtcaccggcatggaggtcgccgagatcgacggcgccccgagaatgggcccgacgttcggc
gccatgatgatctccggccagaaggcggcgcacctggcgctgaaggcgctgggcaggccc
aacgccatcgacgggacggccccggcggcgtcgccggcgtggcgagaggagttcgtgatg
tcgtccaaggacgacgaggtcgtggacgcgtga
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