Pectobacterium parmentieri WPP163: Pecwa_0478
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Entry
Pecwa_0478 CDS
T01106
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa01501
beta-Lactam resistance
pwa01503
Cationic antimicrobial peptide (CAMP) resistance
pwa02020
Two-component system
pwa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Pecwa_0478
09132 Signal transduction
02020 Two-component system
Pecwa_0478
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pecwa_0478
01503 Cationic antimicrobial peptide (CAMP) resistance
Pecwa_0478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwa02000
]
Pecwa_0478
02044 Secretion system [BR:
pwa02044
]
Pecwa_0478
01504 Antimicrobial resistance genes [BR:
pwa01504
]
Pecwa_0478
Transporters [BR:
pwa02000
]
Other transporters
Pores ion channels [TC:
1
]
Pecwa_0478
Secretion system [BR:
pwa02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Pecwa_0478
RTX toxin transporter
Pecwa_0478
Multiple protein transporter
Pecwa_0478
RaxAB-RaxC type I secretion system protein
Pecwa_0478
Antimicrobial resistance genes [BR:
pwa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Pecwa_0478
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Pecwa_0478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
WH4_Lhr
DUF4439
Motif
Other DBs
NCBI-ProteinID:
ACX86315
LinkDB
All DBs
Position
complement(518281..519696)
Genome browser
AA seq
471 aa
AA seq
DB search
MARITHGKTRLLAYFPIALLLCWSSTAFGQAISFSQAWVRLLQSDDSIAAEHAGVDRAQS
LQESAKGLYWPQVNVGASYTRLDKPVELDARDLNPLANHRDIFAALNQLVNISGNPFVTR
FTEQNVVTSSVQVVWPLFTGGRIDAAQSIRAAQVNEAEQMLIVRTLAQFEALAQTYYGVV
MAHQVMKTRQDIEKGMAQHYDHARKLEAQGQIARVEVLSAQSAYDMARIETQKARRSMET
TEMVFAKLIKTEGATPSSSLFVNKTLPELPALVKQTLNTHPGLKVLSAKRDQAKDLIRIE
RAKYAPDVFLFGNYQLYEQDTLAARTTPDWMVGVGVSVPLISREGRSDNIAAAKSAEMQV
NHLEADMRQNLEIAVESTWREARLALEEFNSLSSTEKLAEENVQLRNKAFMQGMSTSLDV
VDALNQLAGAKTQRASAAYRYVVSIARLMAISSQINRFSDYQTQYAIQVMP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaataacacacggtaaaactcggcttctggcctatttccccatagcactactg
ctatgctggtcgtccacggctttcggacaagccatctcatttagtcaggcctgggttcgt
cttctgcaaagcgatgacagcattgccgccgaacatgcaggagtcgatcgcgctcagtcc
ttacaagaatccgccaaaggcctctattggccacaggtcaacgtaggtgccagctatacg
cgccttgataagcctgtcgaactggatgcgcgtgaccttaatccgctggcaaatcatcgg
gacatcttcgccgcactaaaccagcttgttaacatcagcggcaatcccttcgtcacccgc
ttcacagaacaaaacgtggtcaccagttccgttcaggtcgtctggccgttattcactgga
ggccggattgatgccgcgcagtcgatccgtgccgcacaggtcaacgaggcagaacagatg
ctgattgtccgcacgctggcgcagtttgaggcactggcacagacctactacggcgtggtg
atggcacatcaggtaatgaagacgcgtcaggatatagagaaaggcatggcgcagcattat
gaccacgctcgcaagttagaagctcagggacaaatagccagagtcgaagtactgtccgca
caatccgcttatgacatggcgcgtatagaaacacaaaaagcacggcgaagtatggaaacc
acggaaatggtgttcgccaaactcatcaagacagaaggcgcaacgccctcctcttcgctg
ttcgtcaacaaaacgcttcccgaactgccggcgttggtgaaacaaacgctcaatacgcac
cccggcttaaaggtgctctccgccaagcgcgatcaggccaaggatctcatccgtattgag
cgcgccaaatacgctcctgacgtatttctattcggcaactatcaactctatgagcaggac
acgctggcagccagaacgacgccagattggatggtaggcgtcggcgtatccgtcccgctc
atcagccgtgaaggccgttctgataatatcgccgccgcgaaaagcgcagaaatgcaggtt
aaccatctggaagcagatatgcggcaaaaccttgagatcgcggtcgaaagcacgtggcga
gaagctaggttagcgttggaagagttcaattccctgtcttcgacggaaaaactggcagaa
gagaacgttcaattacgcaacaaggcgtttatgcaaggcatgtctacttcgctggacgtt
gtagatgcgttgaatcagttggccggagccaaaacacagcgcgcctccgcagcctatcgt
tacgtggtttccatcgccaggctgatggctatttccagccagataaaccgtttctctgac
taccagacccaatacgctatacaggtgatgccatga
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