Pseudomonas yamanorum: AK972_3204
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Entry
AK972_3204 CDS
T05821
Name
(GenBank) Heavy metal RND efflux outer membrane protein, CzcC family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pym
Pseudomonas yamanorum
Pathway
pym01501
beta-Lactam resistance
pym02024
Quorum sensing
Module
pym_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AK972_3204
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AK972_3204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pym02000
]
AK972_3204
01504 Antimicrobial resistance genes [BR:
pym01504
]
AK972_3204
Transporters [BR:
pym02000
]
Other transporters
Pores ion channels [TC:
1
]
AK972_3204
Antimicrobial resistance genes [BR:
pym01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AK972_3204
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
AK972_3204
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
AK972_3204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
FAM92
Secretin_N_2
Sec8_N
Motif
Other DBs
NCBI-ProteinID:
AMW84004
UniProt:
A0A143GIL0
LinkDB
All DBs
Position
complement(3575001..3576479)
Genome browser
AA seq
492 aa
AA seq
DB search
MTDSTFPTVQRLAMTRGSKLLSLALCGVMLSACAVGPDYKRPELTEPAQYKEAQGWRQAA
PSDSLARGAWWELYGDRQLNELVEKLNSSNQTVAQAEARYRQAASQVRSARGAFFPTVDL
SASKSRASQGTGSSNASLSSSSSGIRDTLNTQLGVSWEADIWGKLRRGLEANEASAEASA
ADLAAMRLSQQSELVQDYLQLRVMDEQTRLLQATVDTYQRSLQMTQNQYRAGVSGKDAIA
QAQTQLKSTQASMIDLIWQRAQLENAIAVLIGVPPANFNLAVSKDIPALPQIPVSLPSQL
LERRPDIAQAERSVIAANANIGVAKTAYYPDLTLSLAGGYSSSTYADWISLPNRFWSVGP
KLAMTLFDGGQRSAEVDRAEASYDETVAKYRQTVLDGFREVENYMVQLKVLEDEAVVSNE
ALDAARESLRLTQNQYKAGLIAYLDVVTVQATALSNERTVLTLLQTRLVASVQLIAALGG
GWDGQMQLSDKK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactcaacgtttcccaccgtgcaacgtctggcgatgactcgcggctccaagctg
ctgagcctggccctgtgcggcgtgatgctcagcgcctgcgccgtcggcccggactacaaa
cgccccgaattgaccgagcctgcccagtacaaagaggcccagggctggcgccaggccgcg
cccagcgactcgttggcccggggcgcctggtgggagttgtacggcgacagacaactgaat
gagctggtagaaaaactcaacagctccaaccagaccgtggcccaggccgaggcgcgttat
cgccaggccgcttcgcaggtgcgcagtgcccgtggggcgttcttccccacggttgacctg
agtgcctcgaaaagccgggccagccagggtaccggcagcagtaacgccagcctcagcagc
tccagcagcggtatccgcgacaccctgaacacccagctcggcgtgagctgggaagccgat
atctggggcaaactgcgccggggcctggaagccaatgaagccagcgccgaagccagcgca
gcggatctcgcggcgatgcgcctgagccagcaatcggagctggtgcaggattacctgcaa
ctgcgggtcatggacgaacagacccgtttgctgcaagccacggtggatacctaccaacgc
tccctgcaaatgactcagaaccaataccgcgccggtgtctcgggcaaggatgccattgcc
caggcccagacccaattgaaaagcacccaggccagcatgatcgacctgatctggcagcgg
gcgcagctggaaaacgcaattgccgtgctgatcggtgtgccgccggccaacttcaacctg
gcggtgagcaaagacattccggcgctgccgcagattccggtgagcctgccgtcgcaactg
ctggaacgccgcccggatatcgcccaggctgagcgctcggtgattgcggccaacgccaat
atcggcgtcgccaagaccgcctactacccggacctgaccctgagcctggccggcggctat
tccagcagcacctacgccgactggatcagcctgccgaaccgcttctggtcggtgggaccg
aaactcgccatgaccctgttcgacggcggccagcgttcggcggaagtcgaccgcgccgaa
gcgtcctacgacgaaaccgtggccaagtaccgccagaccgtactggatggtttccgcgaa
gtggaaaactacatggtgcagctcaaggtcctggaagacgaagcggttgtcagcaacgaa
gccctcgacgccgcccgtgaatcactgcgcctgacccagaaccagtacaaggctggtctg
atcgcttatctcgatgtggtcaccgtgcaagcgacggccctgagcaacgagcgcacggtg
ctgaccctgctgcaaacccggttggtggccagcgtgcaactgatcgcggcgctgggcggt
ggttgggatgggcagatgcagctgagcgacaagaagtaa
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