Pseudomonas yamanorum: AK972_5429
Help
Entry
AK972_5429 CDS
T05821
Name
(GenBank) Type I secretion outer membrane protein, TolC precursor
KO
K12340
outer membrane protein
Organism
pym
Pseudomonas yamanorum
Pathway
pym01501
beta-Lactam resistance
pym01503
Cationic antimicrobial peptide (CAMP) resistance
pym02020
Two-component system
pym03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AK972_5429
09132 Signal transduction
02020 Two-component system
AK972_5429
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AK972_5429
01503 Cationic antimicrobial peptide (CAMP) resistance
AK972_5429
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pym02000
]
AK972_5429
02044 Secretion system [BR:
pym02044
]
AK972_5429
01504 Antimicrobial resistance genes [BR:
pym01504
]
AK972_5429
Transporters [BR:
pym02000
]
Other transporters
Pores ion channels [TC:
1
]
AK972_5429
Secretion system [BR:
pym02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
AK972_5429
RTX toxin transporter
AK972_5429
Multiple protein transporter
AK972_5429
RaxAB-RaxC type I secretion system protein
AK972_5429
Antimicrobial resistance genes [BR:
pym01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
AK972_5429
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
AK972_5429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AMW86229
LinkDB
All DBs
Position
6022548..6023987
Genome browser
AA seq
479 aa
AA seq
DB search
MLRKLSLALAVSCATNGLVWAAEAPLTTKTDLVSVYQEAVDNNADLAAARAQYGAQKEVV
PQARAGLLPNLSAGADINNVRTQLDQPAATVNRDAHSWRATLSQPLFRADRWFQLQAAEA
VNEQAALQLSATEQNLILQSAENYFAVLRAQDNLASTKAEEAAFKRQLDQSNERFDVGLS
DKTDVLQSQASYDTARANRILAQRQVDDAFEALITLTNRQYNSIQGIVHTLPVLPPSPND
AKAWVETAGRQNLNLLASNYAVTAAEETLKQRKAGHAPTLDAVAQYEKGDNDALGFSNPS
AFGQPYHGDVSQRTVGLQLRIPLYSGGLTSSQVRESYSRLGQTEQQREGLRRQVVENTRN
LHRAVNTDVEQVQARRQSIISNQSAVEATEIGYQVGTRNIVDVLDAQRQLYTSVRNYNNS
RYDYILDNLRLKQAAGTLNPGDLQDLARYLKADYNPDKDFLPPDLAKAAAEQLKANPGY
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcaaactttcactggctctcgccgtgtcttgtgcgaccaacggactggtctgg
gcagctgaagcgcccctgacgaccaaaaccgacctggtcagcgtctaccaggaagcggtg
gacaacaacgccgacctggccgccgcccgcgcccaatacggcgcgcagaaagaagtggtg
ccccaggcccgcgccggcttgctgccgaacctgtcggccggtgccgacatcaataatgtg
cgcacccagctggaccaacccgccgccacggtcaaccgcgacgcccattcctggcgtgcg
accttgagccagccgctgttccgcgctgatcgctggttccagctgcaagccgccgaagca
gtcaatgaacaggctgcactgcaactctcggccaccgaacagaacctgatcctgcaaagc
gccgaaaactactttgccgtactgcgtgcccaagacaacctggcctcgaccaaggccgaa
gaagccgcattcaagcgccaactggaccagtccaatgaacgctttgacgttggcctgtcg
gacaagaccgacgtgctgcaatcccaggccagctacgacaccgcccgcgccaaccggatc
ctggcccagcgccaggtggacgacgccttcgaagcgctgatcaccctgaccaaccgccag
tacaactcaatccagggcatcgtgcacacgctgccggtgctgccgccgtcgccgaacgac
gccaaagcctgggtcgaaaccgccggccgccagaacctgaacctgctggccagcaactat
gcggtcaccgccgccgaagaaaccctcaagcaacgcaaggccggccacgcgccgaccctg
gatgccgtggcgcaatatgaaaaaggtgacaatgacgccctgggcttcagcaacccgagc
gccttcggccagccgtatcacggtgacgtgtcgcaacgcactgtaggcttgcagttgagg
atcccgctgtacagcggcggcctgaccagctcgcaagtgcgcgaatcctattcccgcctg
gggcagaccgagcagcagcgcgaaggcctgcgtcgccaggtggtggaaaacacccgtaac
ctgcaccgcgcggtgaacaccgatgtggagcaggtgcaggcgcgccgtcagtcgatcatc
tccaaccagagcgcggtggaagccacggaaatcggttaccaggtgggtacgcgcaacatc
gtcgatgtgctggacgcccagcgccagctgtacacctcggtgcgcaactacaacaacagc
cgctacgactacatcctcgacaacctgcggttgaagcaggcggcgggcacattgaacccc
ggggacttgcaggatttggcgcggtatttgaaggcagactacaacccggacaaggacttc
ctgccaccggacctggccaaggcggctgcggagcagttgaaggctaacccgggttattaa
DBGET
integrated database retrieval system
