Pyramidobacter sp. YE332: RAH42_10520
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Entry
RAH42_10520 CDS
T09677
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pyy
Pyramidobacter sp. YE332
Pathway
pyy01501
beta-Lactam resistance
pyy01503
Cationic antimicrobial peptide (CAMP) resistance
pyy02020
Two-component system
pyy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pyy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RAH42_10520
09132 Signal transduction
02020 Two-component system
RAH42_10520
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RAH42_10520
01503 Cationic antimicrobial peptide (CAMP) resistance
RAH42_10520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pyy02000
]
RAH42_10520
02044 Secretion system [BR:
pyy02044
]
RAH42_10520
01504 Antimicrobial resistance genes [BR:
pyy01504
]
RAH42_10520
Transporters [BR:
pyy02000
]
Other transporters
Pores ion channels [TC:
1
]
RAH42_10520
Secretion system [BR:
pyy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RAH42_10520
RTX toxin transporter
RAH42_10520
Multiple protein transporter
RAH42_10520
RaxAB-RaxC type I secretion system protein
RAH42_10520
Antimicrobial resistance genes [BR:
pyy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
RAH42_10520
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
RAH42_10520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF1978
DUF745
Motif
Other DBs
NCBI-ProteinID:
WOL41322
UniProt:
A0AAU0KF59
LinkDB
All DBs
Position
2227926..2229344
Genome browser
AA seq
472 aa
AA seq
DB search
MPVYKETIAALLAAAVLAVPAAAKDGRASKRPERPVLTTETALELACANNPSLAAAEARI
EQARQQLAQARADKLPKLYAALAGAWQGEEGKVPAVVTVDPKSDPPKVFSGYALNSFEEA
YQAALGVQWLLFSSGAVENTIAARTMAFRGIQTREVRTGQAVENAVLVSYYNLQRARAKL
AVAEEVLALSKEHLSQVRNFFKYGVVAQDEVLRVEVDVSNGELNVISAKNAVDVRWRALE
RAVGTELRSKFDLPEPDRNAAPKDAPHWDEASLYALRPELKALDFSRRAALAVAAASRAS
TGPKIVAGGEVFNTGRDFWPDDLDTWKLSLSLRWDFYDGGKARAQVKEYRARAQELLAQI
EDVKRQVALEVSSAQLNFESARQRIDVASRQVASAQEDYRMALLRYKSSVGTNLDVLDAR
TALTNARTQLVDAVYDMNSSRADLDYALGLSERFKLPDAVPPAAAGRNGAKN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgtacaaggaaacgatcgccgctcttctggcggccgctgtgctggccgtcccc
gccgcggcgaaggacggccgcgcctcaaaacgccccgaacgtcccgtgctgacgacggag
acggcccttgaactggcctgcgcgaacaatccctcgctggcggccgccgaggcccgcatc
gaacaggcccggcagcagctcgcccaggcccgcgccgacaaactgcccaagctgtacgcc
gcgctcgccggggcgtggcagggcgaggagggaaaagttcctgctgttgtaaccgtcgat
ccaaagtccgatccgcctaaagttttcagcggttacgccctcaattccttcgaagaggcg
tatcaggccgcgctcggcgtgcagtggctgcttttcagcagcggcgccgtcgagaacacg
atcgccgcgcgcacaatggccttccgcggcattcagacccgcgaagtccgcaccggccag
gccgtggagaacgccgtgctcgtctcctattacaacctgcagcgcgcccgcgccaagctg
gccgtggccgaagaggtgctcgcgctttccaaagaacatctgtcgcaggtcaggaacttt
ttcaagtacggcgtcgtcgctcaggacgaagtgctgcgcgtggaagtcgacgtgtccaac
ggcgagctgaacgtgatctccgccaaaaacgccgtggacgtgcgctggcgcgcgctcgaa
cgcgccgtcggcaccgagctgcgctcgaaattcgacctgccggagccggaccggaacgcg
gcgccgaaagacgcgccccactgggacgaggccagcctttacgccctgcgtcccgagctg
aaggcgctcgatttctcgcgccgcgccgcgctggccgtcgccgccgcgtcgcgcgcgtct
accggtccgaagattgtcgccggcggagaagttttcaacacggggcgcgatttctggccc
gacgatctggacacgtggaagctgtcgctcagcctgcgatgggatttctacgacggcggc
aaggcccgcgcccaggtcaaggagtacagagcgcgggcgcaggaactgctcgcccagatc
gaagacgtgaaacggcaggtcgcgctggaggtctcgtcggcgcagctgaacttcgaatcg
gcgcgccagcgcatcgacgtggcttcacgccaggtcgccagcgcgcaggaagattaccgc
atggccctgttgcgctataaatccagcgtcggcaccaacctcgacgtgctcgacgcccgc
accgccctgaccaacgcccgcactcagctcgtcgacgccgtttacgacatgaacagcagc
cgcgccgatctcgactacgcgctcggcctttcggaacggttcaagctgcccgacgccgtt
ccgcccgcggcggcaggacggaacggcgcgaaaaattga
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