Raoultella sp. X13: DSD31_03535
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Entry
DSD31_03535 CDS
T05540
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
rao
Raoultella sp. X13
Pathway
rao01501
beta-Lactam resistance
rao01503
Cationic antimicrobial peptide (CAMP) resistance
rao02020
Two-component system
rao03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rao00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DSD31_03535
09132 Signal transduction
02020 Two-component system
DSD31_03535
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DSD31_03535
01503 Cationic antimicrobial peptide (CAMP) resistance
DSD31_03535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rao02000
]
DSD31_03535
02044 Secretion system [BR:
rao02044
]
DSD31_03535
01504 Antimicrobial resistance genes [BR:
rao01504
]
DSD31_03535
Transporters [BR:
rao02000
]
Other transporters
Pores ion channels [TC:
1
]
DSD31_03535
Secretion system [BR:
rao02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DSD31_03535
RTX toxin transporter
DSD31_03535
Multiple protein transporter
DSD31_03535
RaxAB-RaxC type I secretion system protein
DSD31_03535
Antimicrobial resistance genes [BR:
rao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
DSD31_03535
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
DSD31_03535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LRR_NXF1-5
Ribosomal_S5_C
DUF1674
vRNAP_dom
Motif
Other DBs
NCBI-ProteinID:
AXC28601
LinkDB
All DBs
Position
complement(717687..719159)
Genome browser
AA seq
490 aa
AA seq
DB search
MKKLFPILIGLGLTGFSAMSQAENLMQVYQQARVSNPDLRKSAADRDAAFEKINEARSPL
LPQLGLGADYTYTNGYRDSNGVNSNVTSGALQLTQTLFDMSKWRALTLQEKAAGIQDVTY
QTDQQTLILNTATAYFNVLSAIDTLSYTEAQKQAIYRQLDQTTQRFNVGLVAITDVQNAR
SQYDSVLANEVTARNNLDNAVEALRQVTGNYYPELASLNVDGFKTNKPQTVNALLKEAEN
RNLSLLQARLNQDLAREQIRQAQDGHLPTLDLTASTGISNTTYNGSKTNDPTRYGDTDAG
QNKIGLSFSLPLYQGGMVNSQVKQAQYNFVGASEQLESSHRSVVQTVRSSFNNINASISS
INAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQQLSSARYNYLINQLNI
KSALGTLNEQDLLALNNTLGKPVSTSPDSVAPETPQQDANADGYSSNAAPAATPASTRTT
KTSGANPFRQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacttttccccatcctcatcggtctgggcctgactggcttcagcgccatgagc
caggcagaaaacctgatgcaggtttatcagcaggcgcgcgtcagcaaccctgacctgcgt
aaatcagcagccgatcgtgatgctgcattcgagaagatcaatgaagcacgtagcccgtta
ctgcctcagcttggtctgggcgcagattatacttacaccaatggctatcgcgacagcaac
ggcgtgaactcgaacgtcaccagcggcgcgctgcagttaacgcagaccctgtttgatatg
tcgaagtggcgcgccctgacgctgcaggaaaaagcggccggtattcaggatgtcacctat
cagactgaccagcaaacgctgattctgaacaccgcgacggcttactttaacgtcctcagc
gcgattgatacgctttcctataccgaagcgcagaagcaggcaatttaccgccagttggat
cagaccacacagcgctttaacgtaggccttgtggcgatcaccgacgtgcagaacgcccgt
tcacagtacgattcagtactggcaaacgaagtgaccgcacgcaacaacctcgacaacgcg
gtagaagcgctgcgccaggtaaccggcaactactatccggagctggcatcgctgaacgtt
gacggctttaaaaccaacaaaccgcagacggtaaatgcgctgctgaaggaagcggaaaac
cgcaacctgtcgctgctgcaggcgcgtctgaaccaggacctcgcccgcgaacagattcgc
caggcgcaggacggccatctgccgaccctggatttaaccgcctcgaccgggatctcaaac
accacctacaacggttcaaaaaccaacgatccaacgcgctatggcgacactgatgccggg
cagaacaaaattggcctgagcttctcgctgccgctgtatcagggcgggatggtgaactcg
caggtgaaacaggcgcagtacaacttcgttggcgccagcgaacagctggaaagctcacat
cgcagcgtagttcagaccgttcgttcttcctttaataacatcaacgcctctatcagcagc
atcaacgcctacaaacaggcggtggtctctgcgcagagctcccttgatgcgatggaagcc
ggctattccgtggggacgcgtaccatcgtcgacgtcctggatgccaccaccactctgtac
aacgcgaagcagcagctctccagcgcacgttataactacctgattaaccagctgaacatt
aaatctgcgctcggtactctgaacgagcaggatctgctggcgctgaacaacacgctgggc
aaaccggtctcgacatcaccagatagcgtcgcaccggaaaccccgcagcaggatgctaac
gctgatggctacagcagcaatgcagccccggcggcaacaccggcttcgacccgcaccacg
aaaaccagcggcgcgaatcctttccgccagtaa
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