Riemerella anatipestifer RA-GD: RIA_1214
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Entry
RIA_1214 CDS
T02007
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
rar
Riemerella anatipestifer RA-GD
Pathway
rar01501
beta-Lactam resistance
rar01503
Cationic antimicrobial peptide (CAMP) resistance
rar02020
Two-component system
rar03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rar00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RIA_1214
09132 Signal transduction
02020 Two-component system
RIA_1214
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RIA_1214
01503 Cationic antimicrobial peptide (CAMP) resistance
RIA_1214
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rar02000
]
RIA_1214
02044 Secretion system [BR:
rar02044
]
RIA_1214
01504 Antimicrobial resistance genes [BR:
rar01504
]
RIA_1214
Transporters [BR:
rar02000
]
Other transporters
Pores ion channels [TC:
1
]
RIA_1214
Secretion system [BR:
rar02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RIA_1214
RTX toxin transporter
RIA_1214
Multiple protein transporter
RIA_1214
RaxAB-RaxC type I secretion system protein
RIA_1214
Antimicrobial resistance genes [BR:
rar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
RIA_1214
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
RIA_1214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HHH_9
Motif
Other DBs
NCBI-ProteinID:
ADZ12319
LinkDB
All DBs
Position
1203104..1204450
Genome browser
AA seq
448 aa
AA seq
DB search
MKNSIKIISLVALFFQGAFSAQESRMLSLSEAINHAMEHKADAEKARLNIKRGDAEIAEV
KANAFPKIIINNNTTYNPLLQEVIMPNFVNPTQTMRLTLGQRWQSTHMAQLQQVLFNQTV
FTGLKAAKSTKEFYLINAQLTEEQIIEKVANAYYQVYQTEQMLQNLQDNLKIVEQTVKII
KGLYDAGLAKKIDYDRALVSSNNVKANQQQLINAVQLSKNALKFMVGMPMEQEIELPEQS
FEPSVLISENSNSDFSERTELKVLKKQLELLNWKKKASESEYYPTATLIANYGWLGQGAK
MPWWHGEKDKVYWSDIASIGLNISIPVFNGFSTKSKIEKDKIDIEKAQADLREIQLGLDL
AYKNAKTQLENSSITIKNQENNVRLAEEVMANTRANYQYGLATLNDILGAERDLADAKNN
LTKSKLDYKLAEIELLKSQGKLRTLTEK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatagcattaaaattataagtcttgtggctttattttttcagggtgccttttca
gctcaggagtcaagaatgttgtctctgtctgaagctataaatcacgccatggagcataaa
gcagatgccgaaaaggctagactaaacataaaaagaggtgatgccgaaatagcggaggtt
aaagccaatgcttttccaaagataattatcaataataatactacctataaccctttgtta
caggaagttattatgcctaattttgtaaaccctactcaaactatgagacttacactaggg
caaagatggcagtctactcatatggctcaacttcagcaggtactttttaaccaaacggtt
tttacggggttaaaagcggctaaatctactaaggagttttatctcatcaatgcacaactt
acggaagagcagattatagaaaaggtggctaatgcctattatcaagtttatcagacagag
caaatgttacaaaatctgcaagataatctaaagatagtagagcaaacagttaagattatt
aaagggttatatgatgctggtttagcaaagaaaatagactatgaccgagctctagtttcg
tctaataatgtaaaggcaaatcagcaacagcttatcaatgccgtacagctgagtaaaaat
gcactcaagtttatggtaggaatgcctatggaacaagagatagaacttccagagcagagc
tttgagccgtctgtacttatttcggaaaattctaattcagatttttctgaaagaacagaa
cttaaagtgttgaagaaacagctagaactacttaattggaagaaaaaagcttcggaatcc
gaatattatccaacagcaactctaattgctaactatggatggctaggtcaaggagctaaa
atgccttggtggcatggggaaaaagataaggtctattggtcagatatagcctcaataggt
ctcaatattagtattcctgtttttaatggattttctactaaatcaaaaatagaaaaagac
aaaatagatatagaaaaggcacaagctgacctaagggaaattcagttagggttagatttg
gcttataagaacgcaaaaactcaattagaaaatagcagtatcaccattaaaaaccaagag
aataatgtaaggctagcagaagaggttatggcgaatacaagagctaattatcagtatggt
ttggctacgcttaatgatattttgggagcagaaagagatttagctgatgcgaaaaataac
ctcacaaaatctaaactagattataaattggcagaaatagaacttctaaaatcacaaggt
aaactaagaactttaacagaaaaataa
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