Robiginitalea biformata: RB2501_03515
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Entry
RB2501_03515 CDS
T00992
Name
(GenBank) putative outer membrane transport/efflux protein
KO
K12340
outer membrane protein
Organism
rbi
Robiginitalea biformata
Pathway
rbi01501
beta-Lactam resistance
rbi01503
Cationic antimicrobial peptide (CAMP) resistance
rbi02020
Two-component system
rbi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RB2501_03515
09132 Signal transduction
02020 Two-component system
RB2501_03515
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RB2501_03515
01503 Cationic antimicrobial peptide (CAMP) resistance
RB2501_03515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbi02000
]
RB2501_03515
02044 Secretion system [BR:
rbi02044
]
RB2501_03515
01504 Antimicrobial resistance genes [BR:
rbi01504
]
RB2501_03515
Transporters [BR:
rbi02000
]
Other transporters
Pores ion channels [TC:
1
]
RB2501_03515
Secretion system [BR:
rbi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RB2501_03515
RTX toxin transporter
RB2501_03515
Multiple protein transporter
RB2501_03515
RaxAB-RaxC type I secretion system protein
RB2501_03515
Antimicrobial resistance genes [BR:
rbi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
RB2501_03515
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
RB2501_03515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
TssO
Motif
Other DBs
NCBI-ProteinID:
EAR15931
UniProt:
A4CG73
LinkDB
All DBs
Position
complement(51291..52676)
Genome browser
AA seq
461 aa
AA seq
DB search
MNTFKSIRPSRVLRVLFVLFAFSAGVIQAQKREWTLEECVTYAVENNLDVQQFQLAFERT
MLDKSDAIGNLLPAVNAQTQVGRNVGFTIDPSTNAPTTAGITTASANLTASMTLFDGLRN
INQLQRAKMNALASQYQLQDLVDDIRLNVANAYLNVLSNKESLKAFQAQYAVTEQDLNRI
REQVDAGVLPRGDLLEIQATAANLEQQIVNAENNVLLSRIVLAQLLQITDYENFDIADQE
FEVPPSEILGNSPKVIFDKALTFRNDIAFSRSNVELAEQDLKIARGAYLPSLNAFFNYNT
RYSSNTTLPDPANPGSFFSPTFIDQLWILDGISYGARLDVPIFNGWSTRNNVKRAKIDVM
RAELQLEQDKLALENDINTAYLDVQSFAKAYEAAQKTLEARQLALEYARERYEVGLMNAF
DYGQAQARVDDAQASVIQNKYNYIFRLKVLEFYFGLPITLD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctttaaatcaataagaccttcacgcgtcctgcgggtactctttgtgctgttt
gccttttcggcgggggtaatccaggcgcagaaacgggaatggacgctcgaggagtgcgtt
acctatgccgtcgaaaacaacctggacgtccagcagttccaactggcttttgagcggacg
atgctcgataaatcggacgcaatcgggaacctgctccctgctgtgaacgcgcagacccag
gtgggccggaacgtaggttttacgatcgatccgtctaccaacgcccctaccactgcgggg
atcaccactgcgagtgccaacctcactgcgagcatgacgctttttgacgggctcaggaat
atcaaccagttgcaacgggcaaaaatgaatgcccttgccagccagtaccagttacaggac
ctggtggacgacatccgcctgaacgtagccaacgcctacctgaacgtgctctccaacaag
gaatccctcaaggccttccaggcgcaatatgccgtgacggagcaggacctgaaccggatc
cgcgagcaggtagatgccggggttctcccgcggggcgacctgctggagatccaggcaacg
gccgccaacctggaacagcagatcgtcaatgcggagaacaatgtgcttctttcccgcatc
gtgctggcccagcttctgcagatcacggattacgaaaatttcgacattgcggaccaggaa
ttcgaggtgcccccgtccgagatcctgggcaattcgcccaaggtgatttttgacaaggcg
ctgactttccggaacgacatcgccttttcgcggtccaacgtggaattggccgaacaggac
ctgaagattgcacggggggcatatttgccttccctcaatgctttctttaactacaatacc
cggtattccagcaataccaccttaccggatccggccaacccggggtcctttttctcaccg
actttcatcgaccagctatggatcctggatgggatttcctacggggcccggctggatgta
cccatctttaacgggtggagtacccggaacaacgtgaagcgcgccaagatcgacgtgatg
cgggccgaactccaattggagcaggacaaactcgccctggagaacgacatcaataccgct
tacctcgacgtgcagagttttgccaaagcctacgaggctgcccaaaaaaccctggaagcc
cgccaactcgccctggaatacgcccgggagcgctatgaggtggggttgatgaatgccttt
gactacgggcaggcccaggcccgggtagacgatgcacaggcttcggtgatccagaacaaa
tacaactatatcttccggctcaaggtcctggaattctatttcgggctgccgatcacactg
gattaa
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