Roseateles depolymerans: RD2015_1077
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Entry
RD2015_1077 CDS
T04166
Name
(GenBank) RND efflux system, outer membrane lipoprotein,NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
rdp
Roseateles depolymerans
Pathway
rdp01501
beta-Lactam resistance
rdp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD2015_1077
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RD2015_1077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rdp02000
]
RD2015_1077
01504 Antimicrobial resistance genes [BR:
rdp01504
]
RD2015_1077
Transporters [BR:
rdp02000
]
Other transporters
Pores ion channels [TC:
1
]
RD2015_1077
Antimicrobial resistance genes [BR:
rdp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RD2015_1077
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
RD2015_1077
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
RD2015_1077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
IPTL-CTERM
TelK_N
Motif
Other DBs
NCBI-ProteinID:
ALV05570
UniProt:
A0A0U3LGG1
LinkDB
All DBs
Position
1211305..1212756
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AA seq
483 aa
AA seq
DB search
MSRLTLTATGLAVLALVAGLTGCAQAPRTELPAMDPAPAFKETRAGNSPWVVASTDVPLA
WDGWWKAYGDAELDGLEQRLIQNSPDLAAALARYDQARAATETLRAAQSPTVNSSLNVTR
NRQSERRPLRVLGPTSPDWYNSATLGLDASYELDLWGRVRQQVAAGVASEAAAQADLAAA
RLQLQAQLADTVMALRGLDRDDALLKEAEEAYGKALDLVERRHRAGISSGLDLARAQGQL
EAARSQRQQSQAQRAVLEHAIAALVGANASTFAMAPRLDELATPVIPVGVPSTLLQRRPD
IAAAQRRVEAATASLGVARTAYYPSFTLGGQGGFQTSDLGRFIDAPNLFWALGPSITFNL
LDGGRRKAEESRVRAVLEETTQRYRSTVLTAFQQVEDQLVLLDRFGQALENERANVAAAD
RSLALATNRYKAGAANYLEVVTSQTAGLTAKRSANDLATRQRRASIQLIRALGGGWQPAE
PRS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgcctgaccctgactgcgacggggctggcggtgctcgcgctggtggcgggcctg
accggctgcgcgcaggcgccacgcaccgagctgcccgccatggaccccgcgccggccttc
aaggaaacgcgggccggaaactccccctgggtggtggcgtccacggacgtgccgctggcc
tgggacggctggtggaaggcctatggggatgcggagctggatggcctggagcagcgcctc
atccagaacagcccggacctcgccgcggcattggcgcgctacgaccaggctcgcgcggcg
accgagaccttgcgcgcggcccagtctcccacggtcaacagttctctgaacgtcacccgc
aaccgccagtcggagcgacgaccgctgcgggtcctcggccccacgtccccggactggtac
aacagcgccaccctgggcctggacgccagctatgagctggatctctggggccgggttcgg
cagcaggtggcggcgggtgtggcgtccgaagcggcggcgcaggcggacctcgcggccgct
cgcctgcagctgcaggctcaactggcggacacggtcatggccctgcggggcctggaccgt
gacgatgcgctgctgaaggaagctgaggaggcctacggcaaggcgttggacctggtggag
cggcgccacagggcgggcatttcctcgggcctggacctggcgcgagcgcaggggcagctg
gaagcggcgcgttcgcagcgacagcagtcccaggcgcagcgggcggtgctggagcatgcc
attgcagcgctggtgggggccaatgcctcgacctttgccatggcgccgcgcctggacgaa
ttggcgacgccggtcattcccgtgggcgtgccgtcgacgctgttgcagcgccggccggac
attgccgcagcacagcggcgcgtggaagcggccacggccagcttgggcgtggccaggacg
gcgtattacccgtccttcaccctgggcgggcagggcggttttcagaccagcgacctcggc
cgtttcattgatgcacccaacctgttctgggcgctggggccgtcgatcaccttcaatctt
ctggacgggggacgtcgcaaggcggaggagtcacgtgtgcgggcagtgctggaagagacg
acacagcgctatcgcagcacagtgctgacggccttccagcaggtggaggaccaactggtg
ctgctggaccgatttgggcaggcattggagaacgagcgtgccaacgtcgcggcggcggat
cgatcgctggcattggcgaccaatcgctacaaggcgggcgctgcgaattatcttgaagtg
gtgacttcgcaaacggcaggattgacggccaaacgcagcgcgaatgatctggcgacacgt
caacgtcgtgcatcgattcaattgattcgcgcattgggtggcggttggcagccggcagaa
cctcgatcctga
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