Candidatus Rhabdochlamydia oedothoracis: RHABOEDO_001213
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Entry
RHABOEDO_001213 CDS
T07398
Name
(GenBank) Outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
rhaw
Candidatus Rhabdochlamydia oedothoracis
Pathway
rhaw01501
beta-Lactam resistance
rhaw01503
Cationic antimicrobial peptide (CAMP) resistance
rhaw02020
Two-component system
rhaw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhaw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RHABOEDO_001213
09132 Signal transduction
02020 Two-component system
RHABOEDO_001213
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RHABOEDO_001213
01503 Cationic antimicrobial peptide (CAMP) resistance
RHABOEDO_001213
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhaw02000
]
RHABOEDO_001213
02044 Secretion system [BR:
rhaw02044
]
RHABOEDO_001213
01504 Antimicrobial resistance genes [BR:
rhaw01504
]
RHABOEDO_001213
Transporters [BR:
rhaw02000
]
Other transporters
Pores ion channels [TC:
1
]
RHABOEDO_001213
Secretion system [BR:
rhaw02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RHABOEDO_001213
RTX toxin transporter
RHABOEDO_001213
Multiple protein transporter
RHABOEDO_001213
RaxAB-RaxC type I secretion system protein
RHABOEDO_001213
Antimicrobial resistance genes [BR:
rhaw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
RHABOEDO_001213
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
RHABOEDO_001213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QYF48967
LinkDB
All DBs
Position
1234963..1236462
Genome browser
AA seq
499 aa
AA seq
DB search
MSWQILLQSFFVLCACTGCYLNRAVIDPYSYACFTPACRKVNSCILEQYPAELLEKKEPY
GLAELIAIALKNNPQTRSSWAKALVSAASYGQKQSVFFPNITGSFQAIRARQPKMEATSI
ITPESIFGATQSPGSLQSGRGATDIYFGNWGPMLSLSYLLFDFGTQKANAEAARYSLEQA
QFQYNDSIQSLLKTVITDFYRYLYQKELLQANMANVLNAELTLDATEQGLHSGVRPLSDF
LQAKTQLLSQKTNWAAQKQELELAFATLLNDIGLPSYMSLQTQELPQELPKNDLILPLET
LIGIGIQNRADLLSAESALRSQEQMVKMTKRQVLPQLNYQFKIGKTYFSFDGNVTHDKYN
FVSTFNVSMPIFSGFYYRNAIKQAESNVVLAEETLRSLQLNAMKEITVAHSNIHTVFETL
NWAAEFLSAAEEQYSVALNGYQQGTQTILDLISAQTSLVDARAQKAQAMQDWYLALANLS
YATGLISPNTIYSLGDLFE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagttggcaaatattgctacaaagtttttttgtgttatgcgcatgcacgggttgttac
cttaaccgcgctgtaatagatccgtatagctatgcctgttttacacctgcttgtcgcaaa
gtcaattcttgtatcttagagcaatatcctgctgagcttttagaaaaaaaagaaccttat
gggcttgctgagctaattgccatcgctttaaagaacaatcctcaaacaagatctagctgg
gcaaaagcacttgtctctgcagcatcttatggacaaaaacaaagcgtttttttccctaat
ataaccggctcttttcaagccatacgtgcaagacaaccgaaaatggaggcaacttcgata
ataacccccgagtccatttttggagcaacgcaatcacctggctctcttcaatcaggaaga
ggtgctactgatatttactttggcaattggggtcctatgctctctttatcctatttatta
ttcgattttggtacacagaaagcaaatgcagaagcagctcgttattcattagagcaagct
caatttcaatataatgatagcattcaatctttattaaaaaccgtgattacagatttttat
agatacttgtatcaaaaagaattgctacaggcaaatatggcaaatgtgcttaatgcagag
cttactttagatgctacagaacaaggccttcattcaggtgtacgtcctttatccgacttt
ctacaagcaaagacacaattactttctcagaaaacaaactgggctgcacaaaagcaagag
cttgaactagcttttgcaactttgttaaatgatataggccttccttcttatatgtcttta
caaacacaagaactacctcaagaactacccaaaaatgaccttatattacctctagaaacc
ttaatcggcattggtatacaaaatagagctgatctattatctgctgaaagcgctcttcgc
tcccaagaacaaatggtcaaaatgaccaagaggcaagttttacctcaattaaattatcag
tttaaaataggtaaaacctatttttcttttgatggcaatgtcactcatgataaatacaac
tttgtcagcacatttaacgtaagcatgcctattttctctggtttttactaccgcaatgcg
attaaacaagctgaatctaatgtagtacttgcagaagaaacgcttagaagtctgcagtta
aatgctatgaaagaaattaccgttgctcattctaatattcacaccgtctttgaaacactc
aattgggctgcagaatttttatctgctgcagaagaacagtactcggttgctttaaacggc
tatcaacaaggcactcagaccattcttgatcttatatctgctcaaacatctcttgtcgat
gcaagagctcaaaaagcacaagctatgcaagattggtaccttgctttagccaacttaagc
tatgccacaggtttgatttccccaaacaccatctactctttaggagatcttttcgaatga
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